Vincent Voelz - links </head> <body> <p><a href="index.html">home</a> - <a href="research.html">research</a> - <a href="cv.html">cv</a> - <a href="pubs.html">publications</a> - <a href="links.html">links</a> <p> <hr> <table> <tr><td width=600> <h2>Useful Links</h2> <ul> <p><a href="http://folding.stanford.edu/">Folding@Home</a> <p><a href="http://www.isiknowledge.com/">Web of Science</a> <p><a href="http://www.ncbi.nlm.nih.gov/sites/entrez">PubMed</a> <p><a href="http://library.stanford.edu/">Stanford Library</a> </ul> </td></tr> <tr><td width=200> <h2>Code</h2> <ul> <p><a href="http://laplace.compbio.ucsf.edu/~voelzv/HPSandbox/">HPSandbox</a>. A python package for experimenting with the two-dimensional HP lattice model of proteins. <p><a href="http://simtk.org/home/mmtools">mmtools</a>. Python tools for preparing molecular simulations. <p><a href="https://simtk.org/home/chaingrowth">chaingrowth</a>. Python tools for coarse-grained chain growth simulations in multiscale sampling algorithms. </ul> </td></tr> <tr><td width=200> <h2>Lecture Notes</h2> <ul> <li>A Linear Algebra Refresher [<a href="lectures/linalg-refresher.pdf">PDF</a>] <li>Principal Components Analysis (PCA) and other data reduction techniques [<a href="lectures/PCA.pdf">PDF</a>] <li>A Statistics Primer: Rules of Probability and Probability Distributions [<a href="lectures/statprimer.pdf">PDF</a>] <li>Hypothesis Testing [<a href="lectures/hypotesting.pdf">PDF</a>] <li>An Introduction to Information Theory [<a href="lectures/info_theory.pdf">PDF</a>] with an exercise [<a href="lectures/pairprobs.pdf">PDF</a>] </ul> </td></tr> <tr><td width=200> <h2>Reports</h2> <ul> <p>Bernoulli Cubes: measuring effective dimensionality over a binary-partitioned space (5/2003) [<a href="reports/bca.pdf">PDF</a>] </ul> </td></tr> </table> </body> </html>