Publications:

Journals:

  1. Peng Qiu, Z. Jane Wang, and K. J. Ray Liu, "Ensemble dependence model for cancer classification and prediction of cancer and normal gene expression data", Bioinformatics, vol.21, no.14, pp. 3114-3121, 2005. (PDF)

  2. Peng Qiu, Z. Jane Wang, and K. J. Ray Liu, "Polynomial Model Approach for Resynchronization Analysis of Cell-cycle Gene Expression Data", Bioinformatics, vol.22, no.8, pp. 959-966, 2006. (PDF)

  3. Peng Qiu, Z. Jane Wang, K. J. Ray Liu, Zhang-Zhi Hu, and Cathy H. Wu, "Dependence Network Modeling for Biomarker Identification", Bioinformatics, vol.23, no.2, pp. 198-206, 2007. (PDF)

  4. Peng Qiu, Z. Jane Wang, and K. J. Ray Liu, "Genomic Processing for Cancer Classification and Prediction", IEEE signal processing magazine, vol. 24, no.1, pp. 100-110, Jan, 2007. (PDF)

  5. Peng Qiu, Warren D. D'Souza, Thomas J. McAvoy, and K. J. Ray Liu, "Inferential Modeling and Predictive Feedback Control in Real-Time Motion Compensation Using the Treatment Couch During Radiotherapy", Physics in Medicine and Biology, vol. 52, no. 19, pp. 5831-5854, 2007. (PDF)

  6. Peng Qiu, Z. Jane Wang, K. J. Ray Liu, and Zsolt Szabo, "An Activity-Subspace Approach for Estimating the Integrated Input Function and Relative Distribution Volume in PET Parametric Imaging", IEEE Trans Information Technology in Biomedicine, vol., 13, issue, 1, pp., 25-36, 2009. (PDF)

  7. Peng Qiu, and Sylvia K. Plevritis, "Simultaneous Class Discovery and Classification of Microarray Data using Spectral Analysis", Journal of Computational Biology, vol. 16, no. 7, pp. 935-944, 2009. (PDF)

    9. Peng Qiu, Andrew J. Gentles, and Sylvia K. Plevritis, "Fast Calculation of Pairwise Mutual Information for Gene Regulatory Network Reconstruction", Computer Methods and Programs in Biomedicine, vol., 94, issue, 2, pp., 17-180, 2009. (PDF)

  9. Peng Qiu, Andrew J. Gentles, and Sylvia K. Plevritis, "Reducing the Computational Complexity of Information Theoretic Approaches for Reconstructing Gene Regulatory Networks", accepted by Journal of Computational Biology, August, 2009. (PDF)

  10. Peng Qiu, Andrew J. Gentles, and Sylvia K. Plevritis, "Discovering Biological Progression underlying Microarray Samples", submitted to Nature Biotechnology, Sep., 2009.

  11. Peng Qiu, and Sylvia K. Plevritis, "RED-SIGN: REconstructing Directed SIgned Gene regulatory Network from microarray data", in submission to Bioinformatics.

Conferences:

  1. Peng Qiu, Z. Jane Wang, and K. J. Ray Liu, "Ensemble Dependence Model-based Cancer Classification using Gene Microarray Data", IEEE International Workshop on Genomic Signal Processing and Statistics (GENSIPS), 2005. (PDF)

  2. Peng Qiu, Z. Jane Wang, and K. J. Ray Liu, "Tracking the Herd: Resynchronization Analysis of Cell-Cycle Gene Expression Data in Saccharomyces Cerevisiae", IEEE International Conference of the Engineering in Medicine and Biology Society (EMBS), pp. 4826-4829, 2005. (PDF)

  3. Z. Jane Wang, Peng Qiu, and K. J. Ray Liu, "Model-based receptor quantization analysis for PET parametric imaging", IEEE International Conference of the Engineering in Medicine and Biology Society (EMBS), pp. 5908-5911, 2005. (PDF)

  4. Peng Qiu, Z. Jane Wang, and K. J. Ray Liu, "Mixture Principle Component Analysis for Distribution Volume Parametric Imaging in Brain PET Studies", IEEE International Symposium on Biomedical Imaging (ISBI), pp. 928-931, 2006. (PDF)

  5. Peng Qiu, Z. Jane Wang, and K. J. Ray Liu, "Dependence Model and Network for Biomarker Identification and Cancer Classification", 14th European Signal Processing Conference (EUSIPCO) 2006. (PDF)

  6. Peng Qiu, and K. J. Ray Liu, "A Robust Method for QRS Detection based on Modified P-Spectrum", IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP), pp. 501-504, 2008. (PDF)