util
Class PanairRunnerShevell

java.lang.Object
  iterator.AbstractIterator
      util.CommandLineRunner
          util.PanairRunnerShevell

All Implemented Interfaces:

Iterable

Direct Known Subclasses:

PanairRunnerLinux

public class PanairRunnerShevell
extends CommandLineRunner

Extends PanairRunnerLinux to run on shevell, which runs ROCKS Linux and the job scheduler PBS, using the command qsub.

Author:

dgorur

Field Summary

protected java.lang.String

statusString

Fields inherited from class util.CommandLineRunner

commandLine, DEFAULT_POLL_INTERVAL, DEFAULT_RUN_COMMAND, DEFAULT_SCRATCH_DIR, DEFAULT_STATUS_COMMAND, DEFAULT_TIMEOUT_INTERVAL, statArgument, timeElapsed

Fields inherited from class iterator.AbstractIterator

diagnosticString, iter

Constructor Summary

PanairRunnerShevell()

Method Summary

boolean	isTerminated() Returns true after a timeout.
static void	main(java.lang.String[] args) Runs PANAIR interpreting the first argument as an input filename.
static double	readDrag(java.lang.String fileName) Reads the drag value from the given PANAIR output file.
static double[]	readForces(java.lang.String fileName)
static void	removePanairInputFile(java.lang.String panairInputFilename) Deletes the specified PANAIR input file.
void	run(java.lang.String arg) Runs PANAIR on the specified input file.
void	singleIteration() Sleeps for a designated sleep interval.

Methods inherited from class util.CommandLineRunner

getArgList, getPollInterval, getRunCommand, getScratchDir, getStatusCommand, getTimeoutInterval, init, isInline, iterate, run, run, setArgList, setInline, setPollInterval, setRunCommand, setScratchDir, setStatusCommand, setTimeoutInterval, updateDiagnostics

Methods inherited from class iterator.AbstractIterator

isVerbose, printDiagnostics, setVerbose

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

statusString

protected java.lang.String statusString

Constructor Detail

PanairRunnerShevell

public PanairRunnerShevell()

Method Detail

main

public static void main(java.lang.String[] args)

Runs PANAIR interpreting the first argument as an input filename.

Parameters:

args - the list of arguments.

readDrag

public static double readDrag(java.lang.String fileName)
                       throws java.io.IOException,
                              java.io.FileNotFoundException,
                              Exceptions.ComputationException

Reads the drag value from the given PANAIR output file.

Parameters:

fileName - the given PANAIR output file.

Returns:

the drag value in the file.

Throws:

java.io.IOException - if IO error in file read.

java.io.FileNotFoundException - if the given output file does not exist.

Exceptions.ComputationException - if PANAIR did not compute a drag value for some reason, or if there was a negative drag value.

readForces

public static double[] readForces(java.lang.String fileName)
                           throws java.io.IOException,
                                  java.io.FileNotFoundException,
                                  Exceptions.ComputationException

Throws:

java.io.IOException

java.io.FileNotFoundException

Exceptions.ComputationException

removePanairInputFile

public static void removePanairInputFile(java.lang.String panairInputFilename)

Deletes the specified PANAIR input file.

Parameters:

panairInputFilename - the given input file.

singleIteration

public void singleIteration()

Description copied from class: CommandLineRunner

Sleeps for a designated sleep interval.

Specified by:

singleIteration in interface Iterable

Overrides:

singleIteration in class CommandLineRunner

See Also:

Iterable.singleIteration()

isTerminated

public boolean isTerminated()

Description copied from class: CommandLineRunner

Returns true after a timeout.

Specified by:

isTerminated in interface Iterable

Overrides:

isTerminated in class CommandLineRunner

Returns:

true when done.

See Also:

Iterable.isTerminated()

run

public void run(java.lang.String arg)

Runs PANAIR on the specified input file. First runs the command cleanpan, which must be in the PATH. Then calls panair and writes the input filename to the output stream of the process. Finally, calls cleanpan again.

Overrides:

run in class CommandLineRunner

Parameters:

arg - the name of the given input file.