util
Class PanairRunnerLinux

java.lang.Object
  iterator.AbstractIterator
      util.CommandLineRunner
          util.PanairRunnerShevell
              util.PanairRunnerLinux

All Implemented Interfaces:

Iterable

public class PanairRunnerLinux
extends PanairRunnerShevell

Utility class for running PANAIR using a specified input filename.

Author:

dgorur

Field Summary

Fields inherited from class util.PanairRunnerShevell

statusString

Fields inherited from class util.CommandLineRunner

commandLine, DEFAULT_POLL_INTERVAL, DEFAULT_RUN_COMMAND, DEFAULT_SCRATCH_DIR, DEFAULT_STATUS_COMMAND, DEFAULT_TIMEOUT_INTERVAL, statArgument, timeElapsed

Fields inherited from class iterator.AbstractIterator

diagnosticString, iter

Constructor Summary

PanairRunnerLinux()

Method Summary

void	init() Initialization routine
boolean	isTerminated() Returns true after a timeout.
static void	main(java.lang.String[] args) Runs PANAIR interpreting the first argument in the list as a PANAIR input file.
void	run(java.util.ArrayList<java.lang.String> args) Runs panair on a list of input files.
void	singleIteration() Sleeps for a designated sleep interval.

Methods inherited from class util.PanairRunnerShevell

readDrag, readForces, removePanairInputFile, run

Methods inherited from class util.CommandLineRunner

getArgList, getPollInterval, getRunCommand, getScratchDir, getStatusCommand, getTimeoutInterval, isInline, iterate, run, setArgList, setInline, setPollInterval, setRunCommand, setScratchDir, setStatusCommand, setTimeoutInterval, updateDiagnostics

Methods inherited from class iterator.AbstractIterator

isVerbose, printDiagnostics, setVerbose

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

PanairRunnerLinux

public PanairRunnerLinux()

Method Detail

main

public static void main(java.lang.String[] args)

Runs PANAIR interpreting the first argument in the list as a PANAIR input file.

Parameters:

args - the list of arguments

run

public void run(java.util.ArrayList<java.lang.String> args)

Runs panair on a list of input files.

Overrides:

run in class CommandLineRunner

Parameters:

args - the given list of input files.

init

public void init()

Description copied from interface: Iterable

Initialization routine

Specified by:

init in interface Iterable

Overrides:

init in class CommandLineRunner

isTerminated

public boolean isTerminated()

Description copied from class: CommandLineRunner

Returns true after a timeout.

Specified by:

isTerminated in interface Iterable

Overrides:

isTerminated in class PanairRunnerShevell

Returns:

true when done.

See Also:

Iterable.isTerminated()

singleIteration

public void singleIteration()

Description copied from class: CommandLineRunner

Sleeps for a designated sleep interval.

Specified by:

singleIteration in interface Iterable

Overrides:

singleIteration in class PanairRunnerShevell

See Also:

Iterable.singleIteration()