A B C D E F G H I L M N O P Q R S T U V W X Z

C

CaffeArrayFix - Class in caffeinterface

This class creates a simple interface for use of putting arrays into the CAFFE data base and getting them from the data base.

CaffeArrayFix() - Constructor for class caffeinterface.CaffeArrayFix

CaffeClient - Class in caffeinterface

Provides functionality to run CAFFE classes in client-server mode.

CaffeClient() - Constructor for class caffeinterface.CaffeClient

Creates a CaffeClient to connect to the default port on localhost.

CaffeClient(String) - Constructor for class caffeinterface.CaffeClient

Creates a CaffeClient to connect to the requested hosted host using the default port.

CaffeClient(String, int) - Constructor for class caffeinterface.CaffeClient

Creates a CaffeClient to connect to the requested host on the requested port.

CaffeComputeRpc - Class in caffeinterface

Provides a Service that serves CAFFE classes.

CaffeComputeRpc() - Constructor for class caffeinterface.CaffeComputeRpc

CaffeServer - Class in caffeinterface

Provides functionality to run CAFFE classes in client-server mode.

CaffeServer() - Constructor for class caffeinterface.CaffeServer

Creates a CaffeServer listening on the default port.

CaffeServer(CaffeToVectorFunction) - Constructor for class caffeinterface.CaffeServer

Creates a CaffeServer serving the given CaffeToVectorFunction on the default port.

CaffeServer(CaffeToVectorFunction, int) - Constructor for class caffeinterface.CaffeServer

Creates a CaffeServer serving the given CaffeToVectorFunction on the requested port.

CaffeToScalarFunction - Class in caffeinterface

Simplifies the use of CaffeClass for computation.

CaffeToScalarFunction() - Constructor for class caffeinterface.CaffeToScalarFunction

CaffeToVectorFunction - Class in caffeinterface

Provides functionality similar to CaffeToScalarFunction, but for the case where there are multiple outputs computed by CAFFE.

CaffeToVectorFunction() - Constructor for class caffeinterface.CaffeToVectorFunction

calibrate() - Method in class model.BasicTwoFidelityModel

calibrate() - Method in interface model.DataFit

Calibrates this DataFit.

calibrate() - Method in class model.GPRegression

Maximizes log marginal likelihood of the data.

calibrate() - Method in class model.PenaltyFunctionModel

calibrateOptional() - Method in class model.BasicTwoFidelityModel

calibrateOptional() - Method in interface model.DataFit

Optional calibration, based on some measure of calibration being required.

calibrateOptional() - Method in class model.GPRegression

calibrateOptional() - Method in class model.PenaltyFunctionModel

callMethod(Descriptors.MethodDescriptor, RpcController, Message, RpcCallback<Message>) - Method in class protobuf.ComputeServiceProtos.Compute

cart3dRunner - Static variable in class function.WaveDragAxisymmetric.CART3D

Cart3DRunner - Class in util

Runs CART3D with or without using a job-queueing system.

Cart3DRunner() - Constructor for class util.Cart3DRunner

Default constructor.

Cart3DRunner(boolean) - Constructor for class util.Cart3DRunner

centerOn(double[]) - Method in class util.Hypercube

Centers this Hypercube on the given point.

centerOn(DoubleMatrix1D) - Method in class util.Hypercube

Centers this Hypercube on the given point.

checkDimensions(double[]) - Method in class function.BasicScalarFunction

Checks the validity of the given array as an input.

checkInputDimension(double[]) - Method in class function.BasicVectorFunction

Checks the input dimensions of the provided input.

CholeskyFactor - Class in util

Implements a square lower-triangular matrix.

CholeskyFactor(CholeskyDecomposition) - Constructor for class util.CholeskyFactor

Constructs a CholeskyFactor using the given CholeskyDecomposition.

CholeskyFactor(double[][]) - Constructor for class util.CholeskyFactor

Constructs a lower triangular matrix by interpreting the given double[][] array as such.

CholeskyFactor(DoubleMatrix2D) - Constructor for class util.CholeskyFactor

Constructs a lower-triangular matrix using the lower triangle of the given matrix.

CholeskyFactor(int) - Constructor for class util.CholeskyFactor

Constructs a lower-triangular matrix having the given number of rows.

clear() - Method in class data.DataHandler

Clears all data.

clear() - Method in interface data.DataListener

Notification that all data has been removed.

clear() - Method in class data.OptimizationDataHandler

clear() - Method in class iterator.AbstractOptimizer

clear() - Method in class model.BasicTwoFidelityModel

clear() - Method in class model.GPRegression

clear() - Method in class model.PenaltyFunctionModel

clear() - Method in class protobuf.ComputeServiceProtos.Matrix.Builder

clearRowCount() - Method in class protobuf.ComputeServiceProtos.Matrix.Builder

clearValues() - Method in class protobuf.ComputeServiceProtos.Matrix.Builder

clone() - Method in class protobuf.ComputeServiceProtos.Matrix.Builder

commandLine - Variable in class function.WaveDragAxisymmetric.CART3D

CommandLine - Class in util

Supports the execution of commands as they would work in a bash shell environment.

CommandLine() - Constructor for class util.CommandLine

Default constructor.

CommandLine(String[]) - Constructor for class util.CommandLine

Constructs a command line and invokes the given shell commands, specified as a String array.

commandLine - Variable in class util.CommandLineRunner

CommandLineRunner - Class in util

Utility to assist running a tool from the command line.

CommandLineRunner() - Constructor for class util.CommandLineRunner

Default constructor.

CommandLineRunner(boolean) - Constructor for class util.CommandLineRunner

comparator - Variable in class iterator.BasicRealEncodedGA

compare(DataPoint, DataPoint) - Method in class data.DataPointComparer

compare(DataPoint, DataPoint) - Method in class data.MultiobjectiveComparator

compare(DataPoint, DataPoint) - Method in class data.PenaltyFunctionComparer

Computable - Interface in function

The core interface of this package.

compute(DoubleMatrix2D, DoubleMatrix2D) - Method in class caffeinterface.CaffeClient

Calls the Compute#compute(RpcController, Matrix, RpcCallback) method on the CAFFE class service hosted remotely.

compute(RpcController, ComputeServiceProtos.Matrix, RpcCallback<ComputeServiceProtos.Matrix>) - Method in class caffeinterface.CaffeComputeRpc

Converts the given ComputeServiceProtos.Matrix into a DoubleMatrix2D, then invokes the CaffeToVectorFunction served by this service on the result.

compute(double[]) - Method in class function.BasicScalarFunction

compute(double[], double[]) - Method in class function.BasicScalarFunction

compute(double[][], double[]) - Method in class function.BasicScalarFunction

compute(double[][], double[][]) - Method in class function.BasicScalarFunction

compute(DoubleMatrix1D) - Method in class function.BasicScalarFunction

compute(DoubleMatrix2D, DoubleMatrix1D) - Method in class function.BasicScalarFunction

compute(double[]) - Method in class function.BasicVectorFunction

compute(double[], double[]) - Method in class function.BasicVectorFunction

compute(double[][], double[][]) - Method in class function.BasicVectorFunction

compute(DoubleMatrix1D, DoubleMatrix1D) - Method in class function.BasicVectorFunction

compute(DoubleMatrix2D, DoubleMatrix2D) - Method in class function.BasicVectorFunction

compute(double[], double[]) - Method in interface function.Computable

Computes the outputs corresponding to the given input, and stores the result in the supplied array.

compute(double[][], double[][]) - Method in interface function.Computable

Computes the outputs corresponding to the given set of inputs and stores the results in the given array, which cannot be null.

compute(double[]) - Method in interface function.ScalarFunction

Computes the output corresponding to the given input.

compute(double[][], double[]) - Method in interface function.ScalarFunction

Computes the outputs for the given inputs, and stores the result in the supplied array.

compute(DoubleMatrix1D) - Method in interface function.ScalarFunction

Computes the output corresponding to the given input.

compute(DoubleMatrix2D, DoubleMatrix1D) - Method in interface function.ScalarFunction

Computes the outputs for the given inputs, and stores the result in the given vector.

compute(double[]) - Method in interface function.VectorFunction

Computes the outputs corresponding to the given input.

compute(double[][], double[][]) - Method in interface function.VectorFunction

Computes the outputs corresponding to the given set of inputs and stores the results in the given array, which cannot be null.

compute(DoubleMatrix1D, DoubleMatrix1D) - Method in interface function.VectorFunction

Computes the outputs corresponding to the given input, and stores the result in the supplied vector, which cannot be null.

compute(DoubleMatrix2D, DoubleMatrix2D) - Method in interface function.VectorFunction

Computes the outputs corresponding to the given set of inputs and stores the result in the given array, which cannot be null.

compute(RpcController, ComputeServiceProtos.Matrix, RpcCallback<ComputeServiceProtos.Matrix>) - Method in class protobuf.ComputeServiceProtos.Compute

compute(RpcController, ComputeServiceProtos.Matrix, RpcCallback<ComputeServiceProtos.Matrix>) - Method in class protobuf.ComputeServiceProtos.Compute.Stub

computeConstraintViolations(double[]) - Method in class problem.BasicBoundConstrainedProblem

Computes the bound constraint violations at the given input

computeConstraintViolations(double[]) - Method in class problem.BasicInequalityConstrainedProblem

Computes inequality constraint violations in addition to bound constraint violations.

computeConstraintViolations(double[]) - Method in class problem.VectorFunctionToProblem

computeError(double[]) - Method in class function.Hartman6LoFi

computeF1(double[]) - Method in class function.ZDT1

computeF1(double[]) - Method in class function.ZDTFunction

computeG(double[]) - Method in class function.ZDT1

computeG(double[]) - Method in class function.ZDTFunction

computeH() - Method in class function.ZDT1

computeH() - Method in class function.ZDT2

computeH() - Method in class function.ZDT3

computeH() - Method in class function.ZDTFunction

computeLOOError() - Method in class model.GPRegression

Computes the RMS Leave-One-Out error.

computeNextPoint() - Method in class iterator.AbstractPointOptimizer

Computes the next design to be evaluated.

computeNextPoint() - Method in class iterator.TwoStageAlgoBuilder

computeNextPoint() - Method in class iterator.TwoStageOptimizer

computeNextPoint() - Method in class iterator.TwoStageRiskPerfAlgoBuilder

NOTE: Does nothing!

computeNextPoint() - Method in class iterator.TwoStageRiskPerfOptimizer

computeNextPoints() - Method in class iterator.AbstractPopulationOptimizer

Computes the next set of candidate solutions.

computeNextPoints() - Method in class iterator.ISIS

computeNextPoints() - Method in class iterator.NSGA2

computeNextPoints() - Method in class iterator.PCGA

computeNominalRadius(double, double) - Static method in class function.WaveDragAxisymmetric

Returns the maximum radius of the nominal (quadratic radius distribution) body that has the specified volume.

computeSearsHaackRadius(double, double) - Static method in class function.WaveDragAxisymmetric

Returns the maximum radius of the Sears-Haack body that has the specified volume.

computeSearsHaackVolume(double, double) - Static method in class function.WaveDragAxisymmetric

Returns the volume of the volume-constrained minimum-drag Sears-Haack body of the given length and maximum radius.

ComputeServiceProtos - Class in protobuf

ComputeServiceProtos.Compute - Class in protobuf

ComputeServiceProtos.Compute() - Constructor for class protobuf.ComputeServiceProtos.Compute

ComputeServiceProtos.Compute.Stub - Class in protobuf

ComputeServiceProtos.Matrix - Class in protobuf

ComputeServiceProtos.Matrix.Builder - Class in protobuf

computeVolume(double[], double[]) - Method in class function.WaveDragAxisymmetric.MaxVolumeConstraint

ConstrainedEIDiviner - Class in diviner

Constrained version of the EIDiviner.

ConstrainedEIDiviner() - Constructor for class diviner.ConstrainedEIDiviner

ConstrainedImprovementDiviner - Class in diviner

ImprovementDiviner for constrained problems.

ConstrainedImprovementDiviner() - Constructor for class diviner.ConstrainedImprovementDiviner

Default constructor.

ConstrainedMultiMetricDiviner - Class in diviner

Multi-metric diviner for constrained problems.

ConstrainedMultiMetricDiviner() - Constructor for class diviner.ConstrainedMultiMetricDiviner

ConstrainedTwoStageAlgoBuilder - Class in iterator

A TwoStageAlgoBuilder for constrained problems.

ConstrainedTwoStageAlgoBuilder() - Constructor for class iterator.ConstrainedTwoStageAlgoBuilder

CONSTRAINT_FLAG - Static variable in class function.WaveDragAxisymmetric.MaxRadiusConstraint

constraintViolations - Variable in class problem.BasicBoundConstrainedProblem

constructInfillSample() - Method in class iterator.AdaptiveMultiPointRiskPerfOptimizer

constructInfillSample() - Method in class iterator.MultiPointRiskPerfOptimizer

contains(Object) - Method in class data.DataHandler

contains(double[]) - Method in class util.Hypercube

Checks if the given point is inside this Hypercube.

contains(DoubleMatrix1D) - Method in class util.Hypercube

Checks if the given point is inside this Hypercube.

copy() - Method in class util.CholeskyFactor

Returns a copy of this Cholesky factor.

currentBestG - Variable in class iterator.AbstractPopulationOptimizer