List of Publications

Journal Papers:

• J1. A. H. Talasaz, M. Nemat-Gorgani, Y. Liu, P. Stahl, R. W. Dutton, M. Ronaghi, R. W. Davis, “Prediction of protein orientation upon immobilization on biological and non-biological surfaces,” Proc. Natl. Acad. Sci. USA, (2006), vol. 103, pp. 14773-14778.

• This paper is highlighted in Nature Biotechnology - 24, 1367 (2006) & Nature Methods - 3, 963 (2006).

• J2. S. Bigdeli*, A. H. Talasaz*, P. Ståhl, H. H. J. Persson, M. Ronaghi, R. W. Davis, M. Nemat-Gorgani, “Conformational flexibility of a model protein upon immobilization on self-assembled monolayers,” Biotechnology and Bioengineering, (2008), vol. 100, pp. 19-27

• * These authors contributed equally to this work

• J3. M. Javanmard, A. H. Talasaz, M. Nemat-Gorgani, F. Pease, M. Ronaghi and R. W. Davis, “Targeted Cell Detection Based on Micro-Channel Gating,” Biomicrofluidics (2007), vol. 1, pp. 044103-1-10

• J4. A. H. Talasaz, R. M. Aliabadi, C. Tropini, R. Dick, M. Nemat-Gorgani, M. Ronaghi, R. W. Davis, “Electrical detection of single antibody-antigen interaction with nanoscale pores,” submitted to Nature Nanotechnology

• J5. . A. Powell*, A. H. Talasaz*, H. Zhang, M. Mindrinos, F. R. Pease, S. R. Quake, R. W. Davis, S J. Jeffrey, “Purification of live circulating tumor cells for single cell gene expression analysis,” to be submitted to Science

• * These authors contributed equally to this work

Conference Papers:

• C1. M. Javanmard, A. H. Talasaz, M. Nemat-Gorgani, F. Pease, M. Ronaghi and R. W. Davis, “Direct electrical detection of target cells on a microfluidic biochip,” Proc. of SPIE MEMS/MOEMS, (2008).

• C2. A. H. Talasaz, R. M. Aliabadi, B. Gharizadeh, S. Shokralla, M. Ronaghi, F. Pease, R. W. Davis, “Direct detection of biomolecular interactions with bioactivated nanopores,” Proc. of Micro Total Analysis Systems, (2007).

• C3. A. H. Talasaz, T. A. Zangle, C. Tropini, R. Dick, F. Pease, R. W. Davis, J. G. Santiago, “Real-time control of nanopore wall potential for single-molecule analyses,” Proc. of Micro Total Analysis Systems, (2007).

• C4. M. Javanmard, A. H. Talasaz, M. Nemat-Gorgani, F. Pease, M. Ronaghi and R. W. Davis, “Single Bacteria Detection Based on Micro-Channel Gating,” Proc. of Micro Total Analysis Systems, (2007).

• C5. A. A. Powell, A. H. Talasaz, M. Mindrinos, R. Carlson, F. W. Pease, R. W. Davis, S. S. Jeffrey, “MagSweeper: An automated system for high efficiency and specificity capture of live circulating tumor cells,” Proc. of San Antonio Breast Cancer Symposium, (2007).

• C6. A. H. Talasaz, Y. Liu, M. Ronaghi, R. W. Davis, “Modeling of bioactivated nanopore devices,” Proc. of 28th International Conference of IEEE Engineering in Medicine and Biology, (2006).

• C7. A. H. Talasaz, A. A. Powell, P. Stahl, M. Ronaghi, S. S. Jeffrey, M. Mindrinos, R. W. Davis, “Cell trapping in activated micropores for functional analaysis,” Proc. of 28th International Conference of IEEE Engineering in Medicine and Biology, (2006).

• C8. B. Gharizadeh, M. Nemat-Gorgani, A. H. Talasaz, M. Ghaderi, A. Agah, S. Goel, P. Nyren, M. Ronaghi, “High-throughput pyrosequencing,” Proc. of the 4th International Forum on Post-genome Technologies, (2006)

• C9. A. H. Talasaz, A. A. Powell, M. Mindrinos, R. W. Carlson, F. W. Pease, R. W. Davis, S. S. Jeffrey, “Development of a new device for high throughput isolation of live circulating tumor cells,” Proc. of San Antonio Breast Cancer Symposium, (2006)

• C10. A. H. Talasaz, D. Pantelis, M. Ronaghi, F. W. Pease, R. W. Davis, “Fabrication of customized bioactivated nanopore devices,” Proc. of Micro Total Analysis Systems, (2005).

• C11. P. Boerner, D. Martinez-Galarce, T. Bay, T. Barbee, R. Kumar, A. H. Talasaz, “Coronal Differential Emission Measure Extraction Using EUV Images from the MSSTA Rocket,” Geophysical Research Abstracts, (2005)

• C12. P. Boerner, D. Martinez-Galarce, T. Bay, T. Barbee, A. H. Talasaz, R. Kumar, P. Jain, N. Hakim, “Images of the solar atmosphere from the multi-spectral solar telescope array,” Geophysical Research Abstracts, (2003)

• C13. P. Boerner, D. Martinez-Galarce, T. Bay, T. Barbee, A. H. Talasaz, R. Kumar, P. Jain, N. Hakim, “Results from the MSSTA III,” American Astronomical Society 201st Meeting,(2002)

• C14. A. H. Talasaz, M. N. Kenari, “Peak-to-average reduction in MC-CDMA based on using different spreading and despreading codes,” Proc. of IEEE WCNC’02, (2002)

Patents:

• P1. R. Parsa, A. H. Talasaz, R. T. Howe, “NEMS Memory Having a Cantilever with Nanotip Ends,” U.S. Patent Application No. 11/516,432 Filed on 11/13/2006

• P2. A. H. Talasaz, M. Ronaghi, R. W. Davis, “Array-Based Bioactivated Nanopore Devices,” U.S. Patent Application No. 11/904,345 Filed on 09/27/2007

• P3. A. H. Talasaz, A. Powell, F. R. Pease, M. Mindrinos, R. W. Davis, S J. Jeffrey, “Method and Apparatus for Magnetic Separation of Cells,” U.S. Patent Application No. 61/013,238 Filed on 12/12/2007