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STANFORD UNIVERSITY

INFORMATION TECHNOLOGY SERVICES

Index of Leland Software


The following index covers all software packages installed in pubsw (the campus-wide software tree) or /usr/sweet (the licensed software tree available only to the systems in Sweet Hall), broken down by category and package. Each package also has its own documentation page with additional information, including a URL, a long description, and a complete list of files included in the package. (If more than one version of a package is installed, the primary installed version is listed.)

Here is an alternate view, sorted without regard to category.

Support priorities are marked as follows:

H High priority
M Medium priority
L Low priority
U Unsupported (provided on an as-is basis)

The name of a package doesn't always match the name of a software package as distributed. In particular, most of our package names are in all lowercase, and we remove special characters from package names, remove hyphens, and sometimes shorten the names. The full name for a package should be available on the package's own documentation page.

The software in the Sweet category is only available on the Sweet Hall cluster machines (including the Meyer satellite cluster in Meyer 160). All other software is available to any Stanford campus machine mounting pubsw. Some software, particularly software in the Licensed and Kerberos categories, may require that the user authenticate to AFS before using the software.

If there is an additional software package that you would like to see installed, if you feel that an installed package should be given a higher (or lower) priority than it currently is, or if you have any other questions, please submit a HelpSU request.

Data

Package Version Description
M bc 1.06 An arbitrary precision calculator
L fftw 3.1.1 Fast Discrete Fourier Transform library
M freetds 0.63 Implementation of Sybase and MSSQL API
M gcal 3.01 Calculate and print calendars
L genesis 2.3 Neural system simulator
L gmt 4.1.2 Generic Mapping Tools for spatial plots
M gnuplot 4.0.0 Interactive plotting program
M grace 5.1.19 Motif-based programmable data plotter
M gwave 20051222 Waveform viewer for analog data
L h4h5tools 1.2 Hierarchical Data Format tools
L hdf 4.2r1 Hierarchical Data Format tools and libraries version 4
L hdf5 1.6.5 Hierarchical Data Format tools and libraries version 5
L io_lib 1.9.2 Trace file reading interface
M lapack 3.0 FORTRAN numerical linear algebra library
M mysql 4.0.14 Clients and libraries for MySQL databases
L netcdf 3.6.1 Unidata network Common Data Form library
L octave 2.0.16 High-level language for numerical computations
L oleo 1.99.16 Light-weight curses-based spreadsheet
M pgplot 5.2.2 Scientific graph generation library
L plotutils 2.5 Plotting utilities for 2D scientific data
M r 2.5.1 System for statistical computation and graphics
M rrdtool 1.2.13 Store and display time-series data
U sc 6.21 Very simple spreadsheet program
M sqlite 2.8.17 SQLite implements a self-contained SQL database engine.
L sqsh 2.1 Interactive Sybase database shell
L tda 6.4l Transition data analysis
L units 1.85 Unit conversion and calculation
M xgobi 200204 Interactive multivariate data visualization
L xlispstat 3.52.20 Lisp dialect with statistical and linear algebra
U xmgr 4.1.2 Motif-based data plotter, replaced by Grace

Development

Package Version Description
H autoconf 2.59 Generate scripts to configure software
M automake 1.9.3 Generate portable Makefiles from template files
H binutils 2.16.1 Manipulate object and executable files
L boost 1.33.1 free peer-reviewed portable C++ source libraries
U bwbasic 2.10 Bywater BASIC interpretor
H cvs 1.12.13 Concurrent version control system
L cvs2cl 2.38 Generate a ChangeLog from CVS log data
L cvsplot 1.7.0 Plot statistics from CVS repositories
M ddd 3.3.11 Graphical front-end to command-line debuggers
L dejagnu 1.4.1 Test suite framework
U eiffel Eiffel to C or Java bytecode compiler
U f2c Fortran 77 to C or C++ compiler
U forth 2.1 Forth-83 standard compiler
H gdb 6.3 The GNU debugger
L icmake 6.22 Intelligent C-like MAKEr
L lam 6.1 Message passing parallel programming environment
M libtool 1.5.22 Generic library build and installation tool
H make 3.80 GNU make utility to build software
M pkgconfig 0.20 A library compile/link flag manager
M pvm 3.4.5 Parallel Virtual Machine system
H rcs 5.7 Revision Control System
U sapp Still another pretty printer
U scm 4 Scheme language interpreter
L sfio Safe/Fast I/O library
U snobol 4 SNOBOL4 interpreter
M stow 1.3.3 Software package installation manager
H subversion 1.3.1 Version control system
L swig 1.3.29 Simplified wrapper and interface generator
U tcl 7.3 Old version of the Tcl scripting language
L tclX 7.3 Extended Tcl, some extensions to Tcl

Dicts

Package Version Description
L buildict 1993 ispell dictionary hashing
L dutch96 1997 Dutch ispell dictionary
L espanol 1.7 Spanish ispell dictionary
L francais 1.4 French ispell dictionary
L igerman98 20030222 German ispell dictionary
H ispell 3.3.02 Interactive spelling checker
L ispellit 2001 Italian ispell dictionary
L iswedish 1.2.1 Swedish ispell dictionary
L norsk 20050503 Norwegian ispell dictionary
L portugues 20060426 Portuguese ispell dictionary
L rusispell 0.99g2 Russian ispell dictionary
U spell 1.0 Simple spell checker

Doc

Package Version Description
M djbman 200105 Manual pages for DJB's software
H doc Special link tree for /usr/pubsw/doc
U examples Assorted programming examples
H info Special link tree for /usr/pubsw/info
U learn Tutor for Unix programs
H man Special link tree for /usr/pubsw/man
L misc Various listings and other info files
L perlinfo 5.6 Info pages generated from Perl documentation
L tkinfo 2.8 Graphical browser for info files
L tkman 2.2 Graphical man and info browser

Editors

Package Version Description
U axe 6.1.2 Simple text editor for X
U bpe 1.5 Examine and modify binary files
M elispmanual 21-2.8 Reference manual for Emacs Lisp
H emacs 22.0.50 Extensible real-time display editor
L jed 0.99-18 An extensible text editor
L joe 3.3 Joe's Own Editor
L jove 4.16 Jonathan's Own Version of Emacs
M lyx 1.4.1 A graphical document processor
U mflteco 1995 Historic line editor
M nedit 5.5 Motif GUI style text editor
M nvi 1.79 Standard vi editor
M openoffice 1.0.2 Office suite for Unix
L smedit 3.0 Software Membership text editor for Motif
L vile 9.5 VI Like Emacs
H vim 7.0 Vi IMproved, a programmers text editor
L vitutor 3.0 Interactive tutorial for the vi editor
L xcoral 3.44 Multiwindow editor for X
H xemacs 21.4.19 Extensible text editor with full GUI support

File

Package Version Description
U arc 5.21o Old compression and archive format
U btoa 4.0 Binary to text encoder and decoder
H bzip2 1.0.3 Very good but slow data compression
M cpio 2.6 cpio archive utility
M file 4.16 Identify the nature of files
H findutils 4.2.27 Finding files
U freeze 2.5 Older commpression utility
H grep 2.5.1a Searche files for specified patterns
H gzip 1.3.3 Standard compression utility
L hfsutils 3.2.6 Macintosh file system utilities for Unix
U hpack 0.79 Older archive and compression utility
U lha 1.14i Older PC compression format
L macutil 2.0b3 Unpack and convert Macintosh files on Unix
L mc 4.6.1 Midnight Commander file manager
M mcvert 2.16 Handles BinHex and MacBinary files
L mtools 3.9.10 Access DOS disks from Unix
U mvstape 1995 Read an IBM MVS tape or tape disk file
L netatalk 2.0.3 AppleTalk services for Unix
M sharutils 4.6.2 Create and extract shell archives
L szip 2.0 Lossless file compression utility
H tar 1.15.1 Manage tape archive files
L unarj 2.63a Uncompress ARJ archives
M unzip 5.52 Extract ZIP files
M uudeview 0.5.20 uuencode, base64, and BinHex encoder/decoder
L xdelta 30d Delta management for arbitrary files
M zip 2.31 Compression and archiving utility for ZIP files
H zlib 1.2.3 gzip-compatible compression library
U zoo 2.10 Older PC compression format

Fonts

Package Version Description
L fontconfig 2.3.94 Library for font customization and configuration.
M fonts General collection of fonts
L freetype 1.4pre20030402 Free TrueType font engine
M gsfonts 6.0 Ghostscript fonts
L hbf Asian font collections
L t1lib 5.1.0 Type 1 rasterizer library
L ttf2pk 20010528 TrueType to PK conversion

Games (unsupported)

Package Version Description
U pysol 4.82.1 Huge collection of solitaire games

Graphics

Package Version Description
M cairo 1.0.4 A 2D graphics library
L compface 1.5.2 Utilities for handling X-Face headers
M gd 2.0.33 Graphics library for image creation
H ghostscript 8.53 PostScript rendering engine
L giftrans 1.12 Manipulate GIF transparency
L glut 3.7 OpenGL Utility Toolkit
L graphviz 2.8 Graph visualization software
L graphvizcairo 2.8 Graph visualization software Cairo Extensions
H gtk+ 2.8.17 GUI toolkit
M gv 3.6.1 PostScript viewer
L hp2xx 3.4.4 HP-GL format converter
H imagemagick 6.2.6 Tools to display and manipulate images
L imlib 1.9.15 Image loading and rendering library
L jasper 1.701.0 Implementation of the codec specified in the JPEG-2000 Part-1 standard.
L jbig2dec 0.8 A decoder implementation of the JBIG2 image compression format.
L jbigkit 1.6 JBIG manipulation library
H jpeg 6b JPEG image manipulation library
L lcms 1.15 Color management and conversion library
L libart 2.3.17 2D graphics library
H libpng 1.2.8 Portable Network Graphics manipulation library
L libungif 4.1.4 A library for uncompressed GIFs
L libwmf 0.2.8.4 Library for converting WMF files
M mesa 6.4.2 Clone of OpenGL graphics libraries
L mpeg2vidcodec 1.2 MPEG-2 encoder and decoder
L mpeg_lib 1.2 Older MPEG movie decoding library
U mpegencode 1.5b MPEG level 1 video encoder
L mpegplay 2.4 MPEG level 1 video player
M netpbm 10.33 Image conversion toolkit
L picons 2002.01.30 Archive of small face graphics
L pixmap 2.6pl4 Xpm pixmap editor
L pngmeta 1.11 Extract metadata from PNG images
U povray 3.0 Persistence of Vision Raytracer
L pstoedit 3.44 PostScript to vector graphics converter
L skencil 0.6.17 A vector drawing program
L tgif 4.1.44 2D vector drawing program
L tiff 3.8.2 TIFF image manipulation software
M tk 8.4.12 A GUI widget set
M transfig 3.2.5a7 Portable graphics generation
L xanim 2.80.1 Video player for X
L xbae 4.60.2 Spreadsheet layout Widget set for X Windows
L xbmbrowser 5.1b Interactive X bitmap and pixmap browser
M xcircuit 3.4.23 Electrical circuit diagrammer
M xfig 3.2.5a5 X vector drawing program
L xloadimage 4.1 Image viewer
L xpaint 2.7.8.1 Simple X paint program

Kerberos

Package Version Description
? kadminremctl 1.7
H keeptoken 1.3 Maintain an AFS token
H kftgt 1.13 Forward Kerberos v4 tickets to another host
H krb5 1.4.4.1 MIT Kerberos v5 clients and libraries
H kstart 3.0 More flexible Kerberos kinit
M kthkrb4 1.2.2 KTH Kerberos v4 implementation
H remctl 2.9 Authenticated execution of remote commands
H sident 3.6 S/Ident daemon and request library.
H srvtab 1.6 Download and install srvtabs
H sysctl 1.1.1 Authenticated execution of remote Tcl commands

Languages

Package Version Description
U a60 0.22a Algol 60 interpreter
H bison 1.875 GNU parser generator, similar to yacc
L byacc 990830 Berkeley Yacc LALR(1) parser generator
L c_count 7.11 C-language line counter
L cfortran 4.3 Linkage between C and Fortran
U cim 3.37 Simula to C compiler
M expect 5.43.0 Programmed dialog with interactive programs
H flex 2.5.4a Fast lexical analyzer generator
L ftnchek 3.3.1 Fortran 77 program checker
H gawk 3.1.3 Pattern scanning and processing language
H gcc 4.0.3 GNU Compiler Collection
L gcl 2.6.7 GNU Common Lisp interpreter/compiler
L guile 1.6.7 GNU Scheme interpreter
L guilegtk 0.41 GTK Bindings for GNU Scheme
L indent 2.2.9 Indent and reformat C source code
H jdk 6 Java Development Kit
H m4 1.4.4 GNU m4 macro processor
L ocaml 3.09.2 The Caml dialect of ML
H perl 5.8.8 Practical Extraction and Report Language
H php 5.1.2 Scripting language targetted at web development
M python 2.4.3 Interpreted, interactive, OO language
M re2c 0.10.1 re2c is a tool for writing very fast and very flexible scanners.
L ruby 1.8.4 Object-oriented scripting language
M smlnj 110.0.7 Standard ML of New Jersey compiler
L spectcl 1.1 Tcl GUI builder
M tcl 8.4.12 An embeddable scripting language
L tclx 8.4 Extended Tcl extensions to Tcl
U ucblogo 5.5 Berkeley Logo implementation
L vtcl 1.5.2 Tcl/Tk development environment
L xf 4.3 Interface builder for Tcl/Tk

Libraries

Package Version Description
L atk 1.11.4 ATK is an accessibility toolkit API
H db1 1.85 Embedded database and hash file library
H db2 2.7.7 Embedded database and hash file library
H db3 3.3.11 Embedded database and hash file library
H db4 4.2.52 Embedded database and hash file library
M gdbm 1.8.3 GNU dbm- and ndbm-compatible database library
L gettext 0.14.5 Utilities for localizing software
H glib 2.10.2 General C support library
L gmp 4.2.1 Arbitrary precision arithmetic library
L libcfg+ 0.6.2 Libcfg+ is a command line and configuration file parsing library
L libgcrypt 1.2.2 Libgcrypt is a general purpose cryptographic library based on the code from GnuPG
L libgpgerror 1.3 Libgpg-error is helper library that provides a common set of error codes and descriptions.
L libtasn1 0.2.18 Libtasn1 is a library developed for ASN.1 structures management.
M mm 1.4.0 Portable Shared Memory API Library
L mpfr 2.2.0 Multiple-precision floating-point computations library
H ncurses 5.4 SVr4-compatible curses library
M readline 5.1 Library for input with editing and history
L sdl 1.2.10 Simple DirectMedia Layer
M slang 1.4.9 Embedded C-like programming language

Licensed

Package Version Description
M ar 4.5.1 Native client for Remedy Action Request System
M icaclient 7.0 Citrix ICA client
M mweb 1.0 The Merriam-Webster dictionary and thesaurus
L npsol Solver for constrained optimization problems
H oracle 8.1.7 Oracle clients and client libraries
H rational 2003.06.13 Debugging, profiling, and coverage tools
L sybase 11.1.1r Sybase clients and client libraries
L tsp Econometric model estimation and simulation
U uasm Legato Networker Unix ASM stream utility
L zmodem 3.54 YMODEM/ZMODEM file transfer protocol

Local

Package Version Description
H config Stanford local configuration files
H fetchmail 0.3.0 Download e-mail via Kerberos POP
H fixperms Security fixes for default file permissions
H lbcd 3.3.0 Remotely pollable system load monitor
H local Wide variety of uncategorized local software
U mpr 1.1 Print to a local attached printer
M networking Local software maintained by Stanford Networking
H newsyslog 1.8 Log rotation and archiving
H scripts Stanford local scripts
U sl 1.1 Read standard label tapes
M sweetfinger System status responder for sweetfinger
M systems Local software maintained by Computing Systems
H tracker 1.0 Track software usage
M web Web page generation tools

Mail

Package Version Description
L elm 2.5.6 Older curses-based mail system
M exmh 2.7.2 Graphical mail reader built on MH
L filter 2.3.1 Simple mail filtering program
L mail 7.2 Command-line BSD mail program
M metamail 2.7 MIME handling for Unix mail clients
M movemail Mail download and copying program
L mpack 1.5 Base64 encoder and decoder
H mutt 1.4.2.1i Small but powerful text-based mail client
M nmh 1.2 Email Handling System
H pine 4.4.4 Pine - a Program for Internet News and Email
L premail 0.45 Privacy and cryptography wrapper for mail
H procmail 3.22 Mail filter and processor
L ssmtp 2.61 A null mail transport agent

Misc

Package Version Description
L gtimer 1.1.6 Track time spent on tasks
U legacy Files saved from old versions of packages

Network

Package Version Description
M bind 4.9.5 DNS utilities distributed with BIND
H djbdns 1.05 Authoritative and caching DNS servers
M fping 2.4b2 Fast ping program
M gaim 1.5.0 Multi-protocol instant messaging client
L hesiod 3.0.2 Hesiod DNS library and tools
M host 991529 Nameserver query tool
L irc 3.0 Enhanced IRC client
L kermit 192 Serial and network communication & file transfer
L libpcap 0.9.4 User-level packet capture
L mtr 0.71 Visual traceroute
H ncftp 3.1.9 Enhanced ftp client
L netcat 0.7.1 Read and write TCP and UDP data
L ntalk Talk server daemon
H ntp 4.2.0a Time synchronization daemon
H openldap 2.3.13 Lightweight Directory Access Protocol
M ping 991020 Check status of remote hosts
L rdist 6.1.5 Maintain identical copies of files across hosts
H rsync 2.6.0 Fast incremental file transfer
M tcpdump 3.9.4 Network packet dump
L tf 50b7 Programmable MUD/MUSH/talker client
M traceroute 991603 Find network path to a destination
H ucspi-tcp 0.88 TCP/IP client-server tools
H wget 1.10.2 HTTP and FTP mirroring tool
L ytalk 3.3.0 Multi-user talk program
H zephyr 2.2s Project Athena Zephyr Notification System

News

Package Version Description
H inews 2.0.1 Post news articles via NNTP
L knews 1.0b.1 Graphical threaded newsreader with MIME support
L nn 6.7.2 Older threaded scoring newsreader
H slrn 0.9.8.1 Powerful threaded newsreader
M tin 1.8.2 Easy to use threaded Usenet news reader
M trn 3.6p18 Threaded rn-based newsreader
M trn4 4.0t76 Threaded rn-based newsreader Version 4
L xrn 9.02 Older X-based Usenet news reader

Security

Package Version Description
M cyrussasl 2.1.21 Simple Authentication and Security Layer
M gnupg 1.2.2 OpenPGP encryption and signing
L gnutls 1.2.10 Implements the proposed standards by the IETF's TLS working group
M ifstatus 4.0 Detect promiscuous network
L opencdk 0.5.8 opencdk is a GNU cryptographic library
H openssh 4.5p1 OpenBSD OpenSSH client and server
H openssl 0.9.8a Cryptography library for SSL and TLS
U opie 2.4 One-Time Passwords In Everything
L pgp 2.6.3i Public-key signing and encryption
L pgpgpg 0.13 PGP-compatible GnuPG wrapper
H rpcbind 2.1 Secure RPC registration daemon
L rsaref 2.0.1996.03 Public- and private-key encryption library
M stunnel 4.15 SSL encryption wrapper
H tcpwrappers 7.6 Security wrapper for daemons

Shells

Package Version Description
M bash 3.1 sh-compatible shell with many extensions
L sash 3.4 Safe, statically-linked shell
M screen 4.0.2 Curses-based shell multiplexer
L splitvt 1.6.5 Split terminal screen
H tcsh 6.14.00 Enhanced C shell
M zsh 4.3.2 Extremely powerful interactive shell

Site

Package Version Description
H siteemacs Locally installed Emacs packages
H siteperl 5.8.8 Locally installed Perl modules and add-ons
L sitepython 2.4 Locally installed Python modules and add-ons
H sitexemacs Locally installed XEmacs packages
M texmflocal Locally installed TeX packages

Sound

Package Version Description
L flac 1.1.2 Free Lossless Audio Codec
L gsm 1.0.11 Lossy sound compression
L libao 0.8.6 Cross-platform audio library
L libid3tag 0.15.1b MPEG audio library
L libmad 0.15.1b MPEG audio library
L libogg 1.1.3 Ogg bitstream format implementation
L libvorbis 1.1.2 Vorbis encoding library
L mpg321 0.2.10 MPEG audio player
M realplayer 8.0 Real Audio and Video Player
L sox 12.18.1 The Swiss army knife of sound processing
L speex 1.0.5 Free Codec For Free Speech
L vorbistools 1.1.1 Ogg Vorbis command-line tools

Sweet

Package Version Description
M allegro 8.1 Franz Allegro Common Lisp with CLIM
M ansys 11.0 Multipurpose design analysis
L axiom 2.2 Computer algebra system
H dbmscopy 8.0 Transfers and converts native data files
L eqs 6.1 Structural equations modeling
H forte 8 Sun Forte development tools
M gams 2.50 High-level modeling system for math programming
M gauss 8.0 Matrix-based data analysis
M gaussian 03 Molecular orbital calculations programs
L genstat 5.4.1 General statistical system
L glim 4.0 Generalised Linear Interactive Modeling
M gqopt 7.1 Numerical optimization package
M hlm 6.02 Hierarchical modeling software
M ilog 10.1 Linear programming and algebraic modeling
M imsl 6.0 IMSL Computational Technology Toolkit
M jmsl 1.0 IMSL for Java Programmers
U limdep 7.0 Regression model analysis
M liquid 5.0 Liquid Common Lisp with CLIM
L lispworks 5.0 An implementation of ANSI Common Lisp
M maple 11 Analytical computation and interactive algebra
H math 6.0 Technical computation and visualization
H matlab 7.5 Computation and visualization environment
U minitab 9.1 Statistical Analysis Package
M minos 5.5 Large-scale optimization solver
M nagcl 8 NAG C Library
M nagfl 21 NAG Fortran Library
M nagfn 4 NAG Fortran 90 Library
M nagfs 2 NAG Fortran SMP Library
M nagnp 5.1 NAG Fortran 95 Compiler
M nr 2.10 Scientific computing libraries from the book
L rats 5.01 Regression Analysis of Time Series
H sas 9.1 Data analysis, management, and presentation
M sicstus 4.0.1 A Prolog development system
M splus 7.0 Data analysis, mining, and statistical modeling
M spss 6.1.4 Statistical analysis and data management
M statase 10.0 Statistics Analysis Package
M stattransfer 9.3 Statistical data transfer and conversion
H sunstudio 10 Sun Studio (Forte) development tools

System

Package Version Description
H coreutils 5.93 Basic system utilities
H daemontools 0.76 Unix daemon management tools
M lsof 4.77 LiSt Open Files
M mcsysinfo 5.0.0.7 Hardware and OS information probe
L scsiinfo 4.7 List SCSI devices attached to system
L scsiping 2.0 Query SCSI disks and return information
M sysinfo 4.0.2 Hardware and OS information probe
M tmpreaper 1.6.6 Purge old files from temporary directories
H top 3.6 Interactive process viewer
M uniread 1.00 Command line editing for anything
U vttest 20000208 Test terminal compatibility

Text

Package Version Description
H acroread 5.0.5 Adobe Acrobat PDF reader
L canna 3.7p3 Chinese/Japanese text input system
L cnprint 3.30b Print or convert CJK text to PostScript
L detex 2.7 A filter to strip TeX commands from a .tex file
L diffstat 1.41 Utility to make a histogram from diff output
H diffutils 2.8.1 Display line-by-line differences in text files
L doxygen 1.4.6 Source code and API documentation system
L dvi2tty 5.3.1 Convert DVI to ASCII text
H enscript 1.6.1 Convert ASCII to PostScript
M expat 1.95.8 XML parsing library
L fop 0.20.4 XSL-driven print formatter
U gf 0.46 SGML parser and converter
L glimpse 3.6 Indexing and query system
H groff 1.19.2 *roff-compatible document processor
L html2ps 1.0b3 HTML to PostScript converter
L hyperlatex 2.6 Produce HTML pages from custom LaTeX files
L idutils