Lab Meeting
 
  Lab Meeting Schedule Autumn 2009-2010
Date Speaker Topic
10 / 1 / 2009 Zhengqing Ouyang Combinatorial Gene Regulation in Embryonic Stem Cells
10 / 8 / 2009 Fan Wang Cross Plateform Implementation of CisGenome Browser
10 / 15 / 2009 Thomas Zhang DNA Copy Number Reconstruction by Penalized Estimation and Imputation
10 / 22 / 2009 Mavis Li mRNA Isoforms through Heaviest Bundling
10 / 29 / 2009 Hui Jiang Exploring Isoform-Specific Gene Expression
11 / 05 / 2009 Wenxiu Ma Histone ChIP-SEQ Data Analysis
11 / 12 / 2009 Yuqiong Pan Molecular Dissecting Definitive Endoderm Differentiation of Human Embryonic Stem Cells by Multichannel FACS
11 / 19 / 2009 Jun Li Modeling Non-Uniformity in Short-Read Rates in RNA-Seq
12 / 03 / 2009 Kin Fai Au  
  Sofia Kyriazopoulou-Panagiotopoulou  
  David Hiller  
  Bokyung Choi  
  Nicholas Johnson  

Lab meeting is held on every Thursday at 11:00am - 1:00pm in Clark Center E105.


Lab Meeting Schedule Summer 2008-2009
Date Speaker Topic
07 / 02 / 2009 Kin Fai Au De novo Exon Junctions form Paired-end RNA-Seq Data
07 / 09 / 2009 Sofia Kyriazopoulou-Panagiotopoulou RUNX ChIP-SEQ Data Analysis
07 / 23 / 2009 David Hiller Alternative Splicing Analysis
08 / 06 / 2009 Bokyung Choi Gaussian Mixture Networks
08 / 13 / 2009 Prof. Lexin Li, NCSU Sliced Inverse Regression and Beyond
08 / 20 / 2009 Wenyi Wang Detecting Rare Variants in Candidate Genes for Mitochondrial Diseases using Resequencing Microarrays
08 / 27 / 2009 Nicholas Johnson Dynamic Programming to Fit Fused Lasso
09 / 03 / 2009 Narges Bani Asad Reconfigurable Computing Engine for Flow Cytometry Analysis
09 / 10 / 2009 Xi Chen Study Transcriptional Regulatory Network in mESC using RNAi and BeadChip Array
09 / 17 / 2009 Li Ma Convergence of Posterior Distributions in Nonparametric Problems
09 / 24 / 2009 Hong Yang Gene Expression Profiling Comparisons

Lab meeting is held on every Thursday at 11:00am - 1:00pm in Clark Center E105.


Lab Meeting Schedule Spring 2008-2009
Date Speaker Topic
04 / 02 / 2009 David Hiller Extended Li and Wong Model: Initial Simulations
04 / 09 / 2009 Li Ma Nonparametric Density Estimation with Optional Polya Trees
04 / 16 / 2009 Xi Chen RNAi Methods to Study the Effect of Gene Knockdown on the Transcriptional Network on mESC
04 / 23 / 2009 Baiyu Zhou Analysis of ChIP-Seq Histone Modification and Transcription Factor Data
04 / 30 / 2009 Bokyung Choi Predication Model of IVF
05 / 07 / 2009 Nicholas Johnson Haplotype Inference
05 / 14 / 2009 Prof. Ping Ma, UIUC Statistical Modeling of Time Course Gene Expressions
05 / 21 / 2009 Narges Bani Asad Reconfigurable Engine Inference
05 / 28 / 2009 Zhengqing Ouyang Bivalent Chromatin Structure and Gene Expression
06 / 04 / 2009 Hui Jiang RNA-SEQ Analysis
06 / 11 / 2009 Wenxiu Ma ChIP-SEQ Data Analysis
06 / 18 / 2009 Yuqiong Pan Molecular Dissecting Early Endoderm Differentiation from hESCs at Single Cell Level
06 / 25 / 2009 Jun Li Modeling the Affinities in RNA-Seq

Lab meeting is held on every Thursday at 11:00am - 1:00pm in Clark Center E105.


Lab Meeting Schedule Winter 2008-2009
Date Speaker Topic
01 / 08 / 2009 Li Ma Testing for Interactions in Association Studies
01 / 15 / 2009 Xi Chen Study Transcriptional Regulatory Network in Mouse Embryonic Stem Cells
01 / 22 / 2009 Baiyu Zhou Analysis of Longitudinal Multi-Factorial Microarrray Data
01 / 29 / 2009 Bokyung Choi Learning Gaussian Networks
02 / 05 / 2009 Hong Yang Microarray Data Analysis
02 / 12 / 2009 Nicholas Johnson  
02 / 26 / 2009 Narges Bani Asad Bayesian Network Learning
03 / 05 / 2009 Zhengqing Ouyang Integrated Analysis of ChIP-seq and Gene Expression Data
03 / 12 / 2009 Hui Jiang RNA-SEQ Analysis
03 / 19 / 2009 Wenxiu Ma Gene Regulation in Mammalian Sonic Hedgehog Signaling Pathway
03 / 26 / 2009 Yuqiong Pan Characterization of Endoderm Differentiation from Human Embryonic Stem Cells

Lab meeting is held on every Thursday at 11:00am - 1:00pm in Clark Center E105.


Lab Meeting Schedule Fall 2008
Date Speaker Topic
09 / 18 / 2008 Hong Yang Microarray Data Analysis
10 / 02 / 2008 Nicholas Johnson Phasing SNP's with Bayesian Network
10 / 09 / 2008 Narges Bani Asad Bayesian Network Learning
10 / 23 / 2008 Zhengqing Ouyang Integrated Analysis of ChIP-seq and Gene Expression Data
11 / 13 / 2008 Wenxiu Ma Integrated Motif Finding
11 / 20 / 2008 Hui Jiang RNA-SEQ Analysis
12 / 04 / 2008 Yuqiong Pan Characterization of Endoderm Differentiation from Human Embryonic Stem Cells
12 / 11 / 2008 David Hiller Isoform Analysis using Microarrays and RNA-Seq

Lab meeting is held on every Thursday at 11:00am - 1:00pm in Clark Center E105.


Lab Meeting Schedule Summer 2008
Date Speaker Topic
06 / 05 / 2008 Baiyu Zhou Analysis of Multifactor Microarray Data
06 / 12 / 2008 Karen Kapur Cross-Hybridization Modeling and Validation Using Sequencing Estimates
06 / 19 / 2008 Xi Chen Study the Transcriptional Regulatory Network in
Mouse Embryonic Stem Cells
06 / 26 / 2008 Bokyung Choi Gausian Networks and Single Cell Analysis
07 / 10 / 2008 Hong Yang Microarray Data Analysis
07 / 17 / 2008 Zhengqing Ouyang ChIP-chip/seq and Expression Data Analysis
07 / 24 / 2008 Wenxiu Ma Gene Regulation in Mammalian Sonic Hedgehog Signaling Pathway
07 / 31 / 2008 Hui Jiang RNA-SEQ Analysis
08 / 07 / 2008 Yuqiong Pan Characterization of Endoderm Differentiation of hESC
08 / 14 / 2008 David Hiller An Introduction to Glioblastoma and the Cancer Genome Atlas
08 / 21 / 2008 Li Ma Supervised Binary Association Rule Mining with an FP-tree Based Method
08 / 28 / 2008 Baiyu Zhou Analysis of Longitudinal Multifactor Expression Data
09 / 04 / 2008 Bokyung Choi Learning Gausian Network

Lab meeting is held on every Thursday at 9:30am - 11:00am in Clark Center E105.


Lab Meeting Schedule Spring 2008
Date Speaker Topic
04 / 03 / 2008 Li Ma Statistical Inference for Binary Association Rule Mining
04 / 10 / 2008 Nicholas Austin Johnson  
04 / 17 / 2008 Hong Yang Tiling Data Analysis
04 / 24 / 2008 Zhengqing Ouyang Modeling of Transcription Regulation of ESC
05 / 01 / 2008 Wenxiu Ma More on ChIP-SEQ Analysis
05 / 08 / 2008 Hui Jiang RNA-SEQ Analysis
05 / 15 / 2008 Narges Bani Asad  
05 / 22 / 2008 Yuqiong Pan Identify Early Differentiation of Human Embryonic Stem Cells by Multiple Channel FACS
05 / 29 / 2008 David Hiller Mouse Cancer Genomics and Alternative Splicing

Lab meeting is held on every Thursday at 9:30am - 11:00am in Clark Center E305.


Lab Meeting Schedule Winter 2008
Date Speaker Topic
01 / 09 / 2008 Nicholas Austin Johnson Bayesian Network Learning with Interventional Data
01 / 17 / 2008 Hong Yang Gene Array analysis of Expression
01 / 24 / 2008 Zhengqing Ouyang Deciphering the Transcriptional Circuitry of Embryonic Stem Cells
01 / 31 / 2008 Wenxiu Ma ChIP-SEQ analysis
02 / 07 / 2008 Hui Jiang Cross-Entropy Method
02 / 14 / 2008 Narges Bani Asad The Counting Machine
02 / 21 / 2008 Yuqiong Pan Identify Early Differentiation of Human Embryonic Stem Cells by Multiple Channel FACS
02 / 28 / 2008 David Hiller Two Projects: Mouse Ovary Development and Exon Array Junction Probes
03 / 06 /2008 Baiyu Zhou Extension of Gene Set Enrichment Analysis
03 / 13 / 2008 Karen Kapur Cross-Hybridization & Probe Behavior
03 / 20 / 2008 Xi Chen Study the Transcriptional Regulatory Network in
Mouse Embryonic Stem Cells
03 / 27 / 2008 Bokyung Choi Learning Gaussian Networks

Lab meeting is held on every Thursday at 9:30am - 11:00am in Clark Center E305.


Lab Meeting Schedule Fall 2007
Date Speaker Topic
09 / 26 / 2007 Hui Jiang CisGenome Browser
10 / 03 / 2007 Wenxiu Ma ChIP-chip v.s. ChIPSeq
10 / 24 / 2007 Narges Bani Asad The Landscape of Parallel Computing Research: ManyCore Computing
10 / 31 / 2007 Yuqiong Pan Identify Three Lineage Precursors during Early Differentiation of hESC
11 / 07 / 2007 Baiyu Zhou Gene Classification Based on Bootstrap
11 / 13 / 2007 Karen Kapur Modelling Cross-Hybridization
12 / 05 / 2007 Xi Chen Studying Gene Expression in Different Human Tissues using Solexa
12 / 12 / 2007 Bokyung Choi Learning Gaussian Networks

Lab meeting is held on every Wednesday at 4:30pm - 6:00pm in Clark Center E105.


Lab Meeting Schedule Summer 2007
Date Speaker Topic
06 / 20 / 2007 Yuqiong Pan Early Differentiation Markers of Human ESC
06 / 27 / 2007 Baiyu Zhou Analysis of Expression Data from Developing Cerebellar Granule Cells
07 / 11 / 2007 Karen Kapur Modeling Probe Effects
08 / 01 / 2007 Nicholas Austin Johnson Sampling Bayesian Networks with Missing Data
08 / 08 / 2007 Yi Xing Exon Analysis of Gene Expression
08 / 15 / 2007 Hong Yang Microarray Analysis of Gene Regulation
08 / 22 / 2007 Bokyung Choi Learning Gaussian Networks
08 / 29 / 2007 Zhengqing Ouyang Inferring the Transcription Regulatory Networks of Human ESC

Lab meeting is held on every Wednesday at 4:30pm - 6:00pm in Clark Center E205.


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  Wong Lab, Bio-X program, Stanford University |  James Clark Center, 318 Campus Drive, Stanford, CA 94305-4065