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Lab Meeting
 
  Lab Meeting Schedule Spring 2012-2013
Date Speaker Topic
3 / 28 / 2013 Kinfai Au Gene Isoform Identification by Second/Third Generation Sequencing
4 / 4 / 2013 Dan Xie Whole Genome Phasing and Analysis of A Personal Methylome
4 / 11 / 2013 Prof. Olga Vitek Statistical Mass Spectrometry-based Proteomics
4 / 18 / 2013 Pegah Afshar Transcript Prediction using Third Generation Sequencing
4 / 25 / 2013 Kun Yang Flow Cytometry Analysis
5 / 16 / 2013 Tung-Yu Wu  
5 / 23 / 2013 Xing Fu  
5 / 30 / 2013 John Mu  
6 / 6 / 2013 Junhee Seok  
6 / 13 / 2013 Luo Lu  
6 / 20 / 2013 Yong Wang  
6 / 27 / 2013 Xi Chen  
7 / 11 / 2013 Xiaowei Zhu  
7 / 18 / 2013 Hyunki Kim  
7 / 25 / 2013 Henry Li  
8 / 1 / 2013 Hong Yang  
8 / 8 / 2013 Maria Xin Ma  
8 / 15 / 2013 Linxi Liu  
8 / 22 / 2013 Mavis Li  
8 / 29 / 2013 Chao Du  
9 / 5 / 2013 Kinfai Au  
9 / 12 / 2013 Dan Xie  
9 / 19 / 2013 Pegah Afshar  
9 / 26 / 2013 Kun Yang  
10 / 3 / 2013 Xing Fu  
10 / 10 / 2013 Tung-Yu Wu  

Lab meeting is held on every Thursday at 11:00am - 1:00pm in Clark Center E105.


Lab Meeting Schedule Winter 2012-2013
Date Speaker Topic
1 / 24 / 2013 Xiaowei Zhu Effects of the chromosome 22q11.2 deletion on gene expression and long range chromosome interactions
1 / 31 / 2013 Hyunki Kim Hardware/Software Co-design For Sequential Bayesian Partition
2 / 7 / 2013 Prof. Malgorzata Bogdan Modified versions of Bayesian Information Criterion for genome-wide association studies
2 / 14 / 2013 Henry Li Toward A Dynamical Systems Model of Human Embryonic Stem Cell Pluripotent Transcription Factor Network
2 / 21 / 2013 Maria Xin Ma Genetic Architecture of AAA (A Whole Genome Sequencing study)
2 / 28 / 2013 Linxi Liu An Improved Rate of Convergence and An Application to Variable Selection
3 / 14 / 2013 Mavis Li Analysis of Transcript Assembly Algorithms Using Long Reads
3 / 21 / 2013 Chao Du Intrinsic Noise In Nonlinear Gene Regulation Model Inference

Lab meeting is held on every Thursday at 11:00am - 1:00pm in Clark Center E105.


Lab Meeting Schedule Autumn 2012-2013
Date Speaker Topic
09 / 20 / 2012 John Mu Phase-seq Data Analysis
10 / 04 / 2012 Alya Raphael Guest speaker (Oral Communication program)
10 / 11 / 2012 Junhee Seok Job Talk
10 / 25 / 2012 Arwen Meister Stochastic Modeling of Gene Regulation
11 / 1 / 2012 Luo Lu Data Compression with BSP
11 / 15 / 2012 Xi Chen Validation Data on RT2 PCR Array
12 / 6 / 2012 Yong Wang Inference and Analysis of Gene Regulatory Network

Lab meeting is held on every Thursday at 11:00am - 1:00pm in Clark Center E105.


Lab Meeting Schedule Summer 2011-2012
Date Speaker Topic
06 / 28 / 2012 Hyunki Kim Faster Bayesian Partition Using FPGA
07 / 19 / 2012 Linxi Liu Convergence Rates of a Class of Density Estimates Based on Adaptive Partitioning
07 / 26 / 2012 Hong Yang Recent Developments in Whole Genome Haplotyping Approaches
08 / 09 / 2012 Henry Li Constructing Dynamical Systems Models from Steady-State Data
08 / 16 / 2012 Mavis Li RNA Editing
08 / 30 / 2012 Chao Du A Preliminary Study on the Modeling of Intrinsic Noise in A Gene Regulation Model
09 / 06 / 2012 Kinfai Au  

Lab meeting is held on every Thursday at 11:00am - 1:00pm in Clark Center E105.


Lab Meeting Schedule Spring 2011-2012
Date Speaker Topic
04 / 05 / 2012 Xi Chen Study of transcriptional regulatory network of mESC
04 / 12 / 2012 John Mu Whole-genome Assembly Overview
04 / 19 / 2012 Luo Lu Sequential Coordinate Partition for Non-parametric Regression
04 / 26 / 2012 Wenxiu Ma Shh signaling and medulloblastoma development
05 / 03 / 2012 Zoey Zhou Learning Mixtures with Adaptive Importance Sampling
05 / 10 / 2012 Junhee Seok Predictive precedence of organ function recovery in severely injured patients
05 / 17 / 2012 Yuping Zhang Modeling Regression Error with an Optional Polya Tree
06 / 21 / 2012 Xiaowei Zhu Update on depression RNA-seq project

Lab meeting is held on every Thursday at 11:00am - 1:00pm in Clark Center E105.


Lab Meeting Schedule Winter 2011-2012
Date Speaker Topic
01 / 12 / 2012 Maria Xin Ma Haplotype Association
01 / 19 / 2012 Linxi Liu Convergence Rates of a Class of Density Estimates Based on Adaptive Partitioning
01 / 26 / 2012 Ye Li Gene Network Inference II
02 / 02 / 2012 Hong Yang 100K Analyses
02 / 16 / 2012 Arwen Meister A Stochastic Model for Gene Regulation
02 / 23 / 2012 Hui Wang A GWA Study for Bronchopulmonary Dysplasia
03 / 01 / 2012 Bokyung Choi Learning Networks in Biological Systems
03 / 08 / 2012 Mavis Li Non-canonical junction detection using SpliceMap and RNA editing
03 / 15 / 2012 Guoqiang Yu Analysis of gene-gene and gene-environment interactions in genome-wide association studies
03 / 29 / 2012 Kin Fai Au Long-Short Read Error Correction

Lab meeting is held on every Thursday at 11:00am - 1:00pm in Clark Center E105.


Lab Meeting Schedule Fall 2011-2012
Date Speaker Topic
10 / 06 / 2011 Zhixing Feng Modeling Polymerase Kinetic of SMART Sequencing Data
10 / 20 / 2011 Luo Lu Sequencial Bayesian Partition
10 / 27 / 2011 Zoey Zhou Learning Mixtures with Adaptive Importance Sampling
11 / 03 / 2011 Junhee Seok Multivariate Survival Analysis with OPT
11 / 10 / 2011 Yuping Zhang A Statistical Framework for Proteomic Data Analysis
11 / 17 / 2011 Thomas Zhang Some Preliminary Results from Ancestry and CNV Analysis of an Admixture Population
12 / 01 / 2011 Xiaowei Zhu Transcriptome Genetics in Major Depressive Disorder
12 / 08 / 2011 Hyunki Kim  

Lab meeting is held on every Thursday at 11:00am - 1:00pm in Clark Center E105.


Lab Meeting Schedule Summer 2010-2011
Date Speaker Topic
06 / 30 / 2011 Hyunki Kim Optional Polya Tree in Cloud Computing
07 / 14 / 2011 Ye Li Gene Network Inference
07 / 21 / 2011 Arwen Meister A Dynamical System Model for Gene Regulation
07 / 28 / 2011 Prof. Raja Velu, Syracuse U. Statistical Challenges in the Analysis of Data from Internet and Finance Industries
08 / 11 / 2011 Mavis Li SPLICEMAP 2
08 / 18 / 2011 Bokyung Choi Dynamic Model of Gene Regulatory Network
08 / 25 / 2011 Kin Fai Au Proteomics Analysis by Mass Spec and RNA-seq
09 / 01 / 2011 John Chong Mu Ultrafast Read Alignment for Resequencing
09 / 15 / 2011 Xi Chen Study of transcriptional regulatory network of mESC
09 / 29 / 2011 Wenxiu Ma Studying Six2 and Wnt Pathways in Nephron Progenitor Cells

Lab meeting is held on every Thursday at 11:00am - 1:00pm in Clark Center E105.


Lab Meeting Schedule Spring 2010-2011
Date Speaker Topic
03 / 31 / 2011 Kin Fai Au Integrated Analysis of RNA-seq and Mass Spec Data on Proteotranscriptomics
04 / 07 / 2011 Li Ma Bayesian Nonparametric Haplotypic Analysis of Family-based Disease Studies
04 / 14 / 2011 John Chong Mu Isoform Assembly and Expression with RNA-Seq
04 / 21 / 2011 Hui Jiang Accelerating Optional Poya Tree Computation I
04 / 28 / 2011 Luo Lu Accelerating Optional Poya Tree Computation II
05 / 05 / 2011 Thomas Zhang Reconstructing DNA Copy Number by Joint Segmentation of Multiple Sequences
05 / 12 / 2011 Wenxiu Ma Computational Algorithms and Statistical Models for Studying Gene Regulatory Network
05 / 19 / 2011 Prof. Chiara Sabatti Quantitative Trait Mapping in a Finnish Cohort
05 / 26 / 2011 Hui Wang Applications of Targeted MLE Based Variable Importance Measurement in Dimension Reduction with Gene Expression Data
06 / 02 / 2011 Zhixing Feng Detecting DNA Modifications by 3rd Generation Sequencing
06 / 09 / 2011 Prof. Lu Tian Efficiency Augmentation with High Dimensional Auxiliary Covariates in a Randomized Clinical Trial
06 / 10 / 2011 2:00-3:00pm Clark E205 Prof. Xiaowo Wang Tsinghua U. Use Epigenetic Information to Predict Human Gene Promoters

Lab meeting is held on every Thursday at 11:00am - 1:00pm in Clark Center E105.


Lab Meeting Schedule Winter 2010-2011
Date Speaker Topic
01 / 06 / 2011 Luo Lu Optional Polya Tree and Bayesian Partition
01 / 20 / 2011 Zhixing Feng The 3rd Generation Sequencing: Beyond G/A/T/C
01 / 27 / 2011 Arwen Bradley A Dynamical Systems Model For Gene Regulatory Network Inference
Hyunki Kim Optional Polya Tree in Cloud Computing
02 / 03 / 2011 Oleg Sergeyevich Mayba A shape-based approach to signal-noise deconvolution in ChIP-Seq Data
02 / 17 / 2011 Mavis Li Transcript Assembly Algorithms
02 / 24 / 2011 Wenxiu Ma Detecting and Understanding Transcriptional Signal in Mammalian Genomes
03 / 03 / 2011 Xiaowei Zhu Characterization of the phosphoproteome in S. cerevisiae
03 / 10 / 2011 Xi Chen Study of transcriptional regulatory network of mESC using RNAi, Beadarray, and ChIP-Seq analysis
03 / 17 / 2011 Hong Yang Newer Generation of Sequencing Technology
03 / 24 / 2011 Bokyung Choi Parameter Discovery for Gene Regulatory Network

Lab meeting is held on every Thursday at 11:00am - 1:00pm in Clark Center E105.


Lab Meeting Schedule Fall 2010-2011
Date Speaker Topic
10 / 07 / 2010 Bokyung Choi Parameter Discovery for Gene Regulatory Network
10 / 14 / 2010 Kin Fai Au PROTOMAP Data
10 / 21 / 2010 Li Ma Nonparametric Priors for Joint Generation of Multiple Distributions
10 / 28 / 2010 Hong Yang Detection of Structural Variation
11 / 04 / 2010 Zoey Zhou Learning Mixtures in Adaptive Importance Sampling
11 / 11 / 2010 Prof. Ovidiu Lipan, U. of Richmond Signal Processing in Biocircuits
11 / 18 / 2010 John Chong Mu Allele Specific Expression Estimation
12 / 02 / 2010 Prof. Eric Xing, CMU Nonparametric Bayesian Models - Learning and Reasoning in Open Possible Worlds

Lab meeting is held on every Thursday at 11:00am - 1:00pm in Clark Center E105.

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  Wong Lab, Bio-X program, Stanford University |  James Clark Center, 318 Campus Drive, Stanford, CA 94305-4065