The Perkins Lab -- Neurospora Genetics and Biology
Department of Biological Sciences, Stanford University

Publications -- Complete 1981 to Present

1981

205. Bistis, G. N., 1981  Chemotropic interactions between trichogynes and conidia of opposite mating type in Neurospora crassa. Mycologia 73: 943-959.

206. Leslie, J. F., 1981  Fungal population genetics. Mycol. Soc. Am. Newsl. 32: 39. (Abstr.)

207. Leslie, J. F., 1981  Inbreeding for isogeneity by backcrossing to a fixed parent in haploid and diploid eukaryotes. Genet. Res. 37: 239-250.

208. Leslie, J. F., and N. B. Raju, 1981  Recessive mutants affecting sexual reproduction in natural Neurospora crassa populations. Genetics 97: s64. (Abstr.)

209. Raju, N. B., 1981  Effect of light on perithecial production in homothallic Neurosporas. Neurospora Newsl. 28: 16-17.

1982

210. Barry, E. G., and J. F. Leslie, 1982  An interstitial pericentric inversion in Neurospora. Can. J. Genet. Cytol. 24: 693-703.

211. Leslie, J. F., 1982  Reciprocal translocation AR30 has a breakpoint distal to all known IIL markers. Neurospora Newsl. 29: 18.

212.  Perkins, D. D., and M. Björkman, 1982  Neurosporacrassa genetic maps, January 1982. Genetic maps 2: 196-205.

213.  Perkins, D. D., and M. Björkman, 1982  Neurosporacrassa genetic maps, May 1982. Neurospora Newsl. 29: 31-40.

214.  Perkins, D. D., A. Radford, D. Newmeyer, and M. Björkman, 1982  Chromosomal loci of Neurosporacrassa. Microbiol. Rev. 46: 426-570.

215. Raju, N. B., 1982  Easy methods for fluorescent staining of Neurospora nuclei. Neurospora Newsl. 29: 24-26.

216.  Deleted.

217. Turner, B. C., and D. D. Perkins, 1982  Conventional and unconventional analysis of an inversion in Neurospora. Genet. Res. 40: 175-190.

1983

218.  Ishikawa, T., and D. D. Perkins, 1983  Additional irreparable temperature-sensitive mutants. Neurospora Newsl. 30: 9.

219.  Perkins, D. D., 1983  Variations in natural populations of Neurospora. Proc. 15th Int. Cong. Genet. (New Delhi), Abstracts of Contributed Papers, p. 451.

220.  Perkins, D. D., N. B. Raju, and E. G. Barry, 1983  Segmental aneuploids of Neurospora that contain only part of the nucleolus organizer. Genetics 104: s55-s56. (Abstr.)

221. Raju, N. B., 1983  Analysis of ascus development in Neurospora crassa using conditional mutants that affect ascospore number. Proc. 15th Int. Cong. Genet. (New Delhi), Abstracts of Contributed Papers, p. 191.

1984

222. Barry, E. G., 1984  Rescue of a nonviable segmental chromosome deficiency in Neurospora. Genetics 107: s7. (Abstr.).

223. Leslie, J. F., and W. B. Watt, 1984  Postmeiotic segregation as a source of mosaics in diploid organisms. Genet. Res. 44: 225-229.

224.  Metzenberg, R. L., J. M. Stevens, E. V. Selker, and E. Morzycka-Wroblewska, 1984  A method for finding the genetic map position of cloned DNA fragments. Neurospora Newsl. 31: 35-39.

225.  Newmeyer, D. L., 1984  Neurospora mutants sensitive both to mutagens and to histidine. Curr. Genet. 9: 65-74.

226.  Perkins, D. D., 1984  Advantages of using the inactive-mating-type am1 strain as a helper component in heterokaryons. Neurospora Newsl. 31: 41-42.

227.  Perkins, D. D., 1984  Neurospora crassa genetic maps, May 1984. Neurospora Newsl. 31: 46-54.

228.  Perkins, D. D., 1984  Neurosporacrassa genetic maps, December 1983. Genetic Maps 3: 277-285.

229.  Perkins, D. D., N. B. Raju, and E. G. Barry, 1984  A chromosome rearrangement in Neurospora that produces segmental aneuploid progeny containing only part of the nucleolus organizer. Chromosoma 89: 8-17.

230. Raju, N. B., 1984  Use of enlarged cells and nuclei for studying mitosis in Neurospora. Protoplasma 121: 87-98.

1985

231. Leslie, J. F., 1985  Construction and analysis of a two-chromosome double reciprocal translocation that functions as a "balancer" in Neurospora crassa. Genetica 67: 109-119.

232. Leslie, J. F., and N. B. Raju, 1985  Recessive mutants from natural populations of Neurosporacrassa that are expressed in the sexual diplophase. Genetics 111: 759-777.

233.  Metzenberg, R. L., J. N. Stevens, E. U. Selker, and E. Morczycka-Wroblewska, 1985  Identification and chromosomal distribution of 5S RNA genes in Neurosporacrassa. Proc. Natl. Acad. Sci. U.S.A. 82: 2067-2071.

234.  Perkins, D. D., 1985  Features of the Neurospora genome. J. Cell. Bioch. Suppl. 9C: 187. (Abstr.)

235.  Perkins, D. D., 1985  Aspects of the Neurospora genome. In  Molecular Genetics of Filamen­tous Fungi(W. E. Timberlake, Ed.), pp. 277-294. A. R. Liss, Inc., New York.

1986

236.  Perkins, D. D., 1986  Determining the order of genes, centromeres, and rearrangement breakpoints in Neurospora by tests of duplication coverage. J. Genet. 65: 121-144.

237.  Perkins, D. D., 1986  col-3 : colonial-3 is an allele of bn : button in Neurospora. Fungal Genet. Newsl. 33: 33-34.

238.  Perkins, D. D., 1986  ro-9 : ropy-9 (R2526) is apparently an allele of da : dapple (R2375) in Neurospora. Fungal Genet. Newsl. 33: 34. 

239.  Perkins, D. D., 1986  Hints and precautions for the care, feeding and breeding of Neurospora. Fungal Genet. Newsl. 33: 35-41.

240.  Perkins, D. D., R. L. Metzenberg, N. B. Raju, E. U. Selker, and E. G. Barry, 1986  Reversal of a Neurospora translocation by crossing over involving displaced rDNA, and methylation of the rDNA segments that result from recombination. Genetics 114: 791-817.

241.  Perkins, D. D., and V. C. Pollard, 1986  Linear growth rates of strains representing ten Neurospora species. Fungal Genet. Newsl. 33: 41-43.

242.  Perkins, D. D., and N. B. Raju, 1986  Neurosporadiscreta, a new heterothallic species defined by its crossing behavior. Exp. Mycol. 10: 323-338.

243.  Perkins, D. D., N. B. Raju, V. C. Pollard, J. L. Campbell, and A. M. Richman, 1986  Use of Neurospora Spore killer strains to obtain centromere linkage data without dissecting asci. Can. J. Genet. Cytol. 28: 971-981.

244. Raju, N. B., 1986  Ascus development in two temperature-sensitive Four-spore mutants of Neurospora crassa. Can. J. Genet. Cytol. 28: 982-990.

245. Raju, N. B., 1986  A simple fluorescent staining method for meiotic chromosomes of Neurospora.  Mycologia 78: 901-906.

246. Raju, N. B., 1986  Postmeiotic mitoses without chromosome replication in a mutagen-sensitive Neurospora mutant. Exp. Mycol. 10: 243-251.

1987

247.

248.  Newmeyer, D., D. D. Perkins, and E. G. Barry, 1987  An annotated pedigree of Neurospora crassa laboratory wild types, showing the probable origin of the nucleolus satellite and showing that certain stocks are not authentic.  Fungal Genet. Newsl. 34: 46-51.

249.  Perkins, D. D., 1987  Mating type switching in filamentous ascomycetes. Genetics 115: 215-216.

250.  Perkins, D. D., 1987  Neurosporacrassa genetic maps. September, 1986. Genetic Maps 4: 312-321.

251.  Perkins, D. D.,  1987  Neurosporacrassa genetic maps.  April, 1987.  Fungal Genet. Newsl. 34: 63-71.

252.  Perkins, D. D., and V. C. Pollard, 1987  Newly mapped chromosomal loci of Neurospora crassa. Fungal Genet. Newsl. 34: 52-53.

253. Raju, N. B., 1987  A Neurospora mutant with abnormal croziers, giant ascospores, and asci having multiple apical pores.  Mycologia 79: 696-706.

254. Raju, N. B., D. D. Perkins, and D. Newmeyer,  1987  Genetically determined nonselective abortion of entire asci in Neurosporacrassa.  Can. J. Bot. 65: 1539-1549.

255. Turner, B. C., 1987  Two ecotypes of Neurospora intermedia. Mycologia. 79: 425-432.

256. Turner, B. C., D. D. Perkins, and N. B. Raju,  1987  Main features of Spore killer systems in Neurospora.  Fungal Genet. Newsl. 34: 59-62.

1988

257. Bojko, M.,  1988  Presence of abnormal synaptonemal complexes in heterohallic species of Neurospora.  Genome 30: 697-709.

258. Bojko, M.,  1988  Abnormal synaptonemal complexes in Neurospora. Genome 30, Suppl. 1: 132. (Abstr.)

259.  Newmeyer, D., V. C. Pollard, and D. D. Perkins,  1988  New supplements for the formate mutant of Neurospora.  A possible role for ascorbic acid?  Fungal Genet. Newsl. 35: 36-37.

260.  Perkins, D. D.,  1988  Main features of vegetative incompatibility in Neurospora.  Fungal Genet. Newsl. 35:44-46.

261.  Perkins, D. D.,  1988  Photoinduced carotenoid synthesis in perithecial-wall tissue of Neurosporacrassa.  Fungal Genet. Newsl. 35:38-39.

262.  Perkins, D. D.,  1988  Comments on Metzenberg's procedure for unordered Neurospora asci.  Fungal Genet. Newsl. 35:29.

263.  Perkins, D. D., and V. C. Pollard,  1988  A highly fertile fluffy allele flY, which produces macroconidia.  Fungal Genet. Newsl. 35:40-41.

264.  Perkins, D. D., and B. C. Turner,  1988  Neurospora from natural populations: toward the population biology of a haploid eukaryote.  Exp. Mycol. 12: 91-131.

265.  Perkins, D. D., and B. C. Turner,  1988  Neurospora in nature. Mycol. Soc. Am. Newsl. 39: 43. (Abstr.)

266. Raju, N. B., 1988  Nonlinear asci without apical pores in the peak mutant of Neurospora.  Mycologia 80: 825-831.

267. Raju, N. B.,  1988 Genetics of the sexual cycle in Neurospora. Genome 30, Suppl. 1: 298. (Abstr.)

268. Raju, N. B.,  1988 Sexual development mutants of Neurosporacrassa.  Mycol. Soc. Am. Newsl. 39: 44-45. (Abstr.)

269. Turner, B. C., and D. D. Perkins,  1988 Maps showing population sampling and geographic distribution of Neurospora species.  Genome 30, Suppl. 1: 132.  (Abstr.)

270. Turner, B. C., N. B. Raju, and D. D. Perkins,  1988  Unique progeny from inter-crossing meiotic drive mutants in Neurospora.  Genome 30, Suppl. 1: 298. (Abstr.)

271. Stuart, W. D., K. Koo, and S. J. Vollmer, 1988  Cloning of mtr, an amino acid transport gene of Neurospora crassa.  Genome 30: 198-203.

1989

272. Bojko, M., 1989  Two kinds of "recombination nodules" in Neurospora crassa.  Genome 32: 309-317.

273.  Kinsey, J. A.,  1989  Restricted distribution of the Tad transposon in strains of Neurospora.  Curr. Genet. 15: 271-275.

274.  Perkins, D. D.,  1989 Neurospora crassa genetic maps, June 1989.  Fungal Genet. Newsl. 36:105-114.  Also in Genetic Maps 5:3.9-3.18 (1990). 

275.  Perkins, D. D.,  1989  Visibly distinguishable albino alleles in Neurospora crassa.  Fungal Genet. Newsl. 36:63.

276.  Perkins, D. D.,  B. C. Turner, V. C. Pollard, and A. Fairfield, 1989  Neurospora strains incorporating fluffy, and their use as testers.  Fungal Genet. Newsl. 36:64-66.

277.  Perkins, D. D., and V. C. Pollard,  1989  Alternate fluffy testers for detecting and diagnosing chromosome rearrangements in Neurospora crassa.  Fungal Genet. Newsl. 36:63-64.

1990

278. Bojko, M., 1990  Synaptic adjustment of inversion loops in Neurospora crassa.  Genetics 124:593-598.

279. Foss, H. M., A. L. Schroeder, N. B. Raju and E. Selker.  1990.  Repeat-induced point mutation (RIP) in a recombination-deficient mutant in Neurospora.  Genet. Soc. Can. Bull. 21 (Suppl.):52.  (Abstr.)

280. Glass, N. L., R. L. Metzenberg and N. B. Raju, 1990  Homothallic Sordariaceae from nature:  The absence of strains containing only the a mating type sequences.  Exp. Mycol. 14: 274-289.

281.  Newmeyer, D., 1990  Filtering small quantities of conidial suspensions to remove mycelial fragments.  Fungal Genet. Newsl. 36:27.

282. Paluh, J. L., M. Plamann, D. Krüger, I. B. Barthelmess, C. Yanofsky and D. D. Perkins,  1990  Determination of the inactivating alterations of two mutant alleles of the Neurospora crassa cross-pathway control gene cpc-1.  Genetics 124:599-606.

283.  Perkins, D. D., 1990  Neurosporacrassa genetic maps, June 1989.  Genetic Maps 5:3.9-3.18.  Also in Fungal Genet. Newsl. 37:105-114 (1989).

284.  Perkins, D. D., 1990  New multicent testers for centromere-linked genes and rearrangements in Neurospora.  Fungal Genet. Newsl. 37:31-32.

285.  Perkins, D. D., 1990  A new report concerning nuclear DNA content and premeiotic DNA synthesis in fungi.  Fungal Genet. Newsl. 37:9.

286. Turner, B. C., 1990  Geographical distribution of resistance to Spore killer in N. crassa and N. intermedia.  Fungal Genet. Newsl. 37:45.

287. Turner, B. C., and A. Fairfield  1990  A putative fifth heterothallic species of Neurospora.  Fungal Genet. Newsl. 37:46.

1991

288.  Maheshwari, R., 1991  Microcycle conidiation and its genetic basis in Neurospora crassa.  J. Gen. Microbiol.  137: 2103-2115.

289.  Maheshwari, R., 1991  A new genotype of Neurospora crassa that selectively produces abundant microconidia in submerged shake culture.  Exp. Mycol. 15: 346-350.

290.  Perkins, D. D., 1991  The first published scientific study of Neurospora, including a description of photoinduction of carotenoids.  Fungal Genet. Newsl. 38: 64-65.

291.  Perkins, D. D., 1991  In praise of diversity.  In  More Gene Manipulations in Fungi.  (J. W. Bennett and L. L. Lasure, eds.)  pp. 3-26. Academic Press.

292.  Perkins, D. D., 1991  Neurospora alcoy tester strains with linkage group VII marked, and their use for mapping translocations.  Fungal Genet. Newsl. 38: 83.

293.  Perkins, D. D., 1991  Transfer of genes and translocations from Neurosporacrassa to N. tetrasperma.  Fungal Genet. Newsl. 38: 84.

294. Raju, N. B., and D. D. Perkins, 1991  Expression of meiotic drive elements Spore killer-2 and Spore killer-3 in asci of Neurospora tetrasperma.  Genetics 129: 25-37.

295.  Schroeder, A. L., and N. B. Raju, 1991  mei-2, a mutagen-sensitive mutant of Neurospora defective in chromosome pairing and meiotic recombination. Mol. Gen. Genet. 231:41-48.

296. Turner, B. C., and D. D. Perkins, 1991  Meiotic drive in Neurospora and other fungi.  Am. Naturalist 137: 416-429.

1992

297. Asch, D. K., G. Frederick, J. A. Kinsey, and D. D. Perkins, 1992  Analy­sis of junction sequences resulting from integration at nonhomologous loci in Neurospora crassa.  Genetics 130:737-748.

298. Barry, E. G., 1992  A combination inversion and translocation in Neurospora crassa with inviable deficiency progeny that can be rescued in hetero­karyons.  Genetics 132:403-412.

299.  Jacobson, D. J., 1992  Control of mating type heterokaryon incompatibility by the tol gene in Neurospora crassa and N. tetrasperma.  Genome 35:347-353.

300.  Jacobson, D. J., 1992  New round spore mutations in Neurospora crassa accompanying changes in a duplication closely linked to the R locus.  Fungal Genet. Newsl.  39:24-27.

301.  Perkins, D. D.,  1992  Neurospora:  The organism behind the molecular revolution.  Genetics 130:687-701.

302.  Perkins, D. D.,  1992  Neurospora chromosomes.  In The Dynamic Genome: Barbara McClintock's Ideas in the Century of Genetics (N. Federoff and D. Botstein, eds.)  pp. 33-44.  Cold Spring Harbor Laboratory Press.

303.  Perkins, D. D.,  1992  Neurospora crassa genetic maps, June 1992.  Fungal Genet. Newsl. 39:61-70.  (Also Genetic Maps, 6th ed.: 3.11-3.20, 1993.)

304.  Perkins, D. D., and M. Bojko,  1992  The basis of decreased recombination in certain outcrosses of Neurospora crassa.  Genome 35:503-509.

305. Raju, N. B., 1992  Functional heterothallism resulting from homokaryotic conidia and ascospores in Neurosporatetrasperma.  Mycol. Res. 96:103-116.

306. Raju, N. B., 1992  Genetic control of the sexual cycle in Neurospora.  Mycol. Res. 96: 241-262.

307. Raju, N. B., and J. F. Leslie, 1992  Cytology of recessive sexual phase mutants from wild strains of Neurospora crassa.  Genome 35:815-826. 

308. Turner, B. C., 1992  Identification of the fragrant strain ATCC 46892 as Neurospora sitophila.  Fungal Genet. Newsl. 39:89.

1993

309. Barry, E. G., and V. C. Pollard  1993  Identification of Neurospora rearrangement chromosomes by PFGE.  Proc. 17th Intern. Cong. Genet. Volume of Abstracts, p. 134.

310.  Fairfield, A., and B. C. Turner, 1993  Substitution of filter paper for sucrose can reverse apparent male sterility in Neurospora.  Fungal Genet. Newsl. 40:30-31.

311.  Howlett, B. C., J. F. Leslie, and D. D. Perkins, 1993  Putative multiple alleles at the vegetative incompatibility loci het-c and het-8 in Neurospora crassa.  Fungal Genet. Newsl. 40:40-42.

311a. Leslie, J. F., 1993  Fungal vegetative incompatibility.  Annu. Rev. Phytopath. 31:127-151.

312. Lu, B. C., 1993  Spreading the synaptonemal complex of Neurospora crassa. Chromo-soma 102:464-472

313.  Perkins, D. D., 1993  Use of a helper strain in Neurospora crassa to maintain stocks of uvs-4 and uvs-5, which deteriorate unless sheltered in heterokaryons.  Fungal Genet. Newsl. 40:66.

314.  Perkins, D. D., and J. A. Kinsey, 1993  New chromosome rearrangements from conidia of Neurospora crassa wild type OR23-1VA.  Fungal Genet. Newsl. 40:67-68.

315.  Perkins, D. D., J. A. Kinsey, D. K. Asch, and G. D. Frederick, 1993  Chromosome rearrangements recovered following transformation of Neurospora crassa.  Genetics 134:729-736.

316.  Perkins, D. D., R. Lande, and F. W. Stahl, 1993  Estimates of the proportion of recombination intermediates that are resolved with crossing over in Neurospora crassa.  Genetics 133: 690-691.  (Appendix A to a paper by E. Foss, et al.)

317.  Perkins, D. D., J. F. Leslie, and D. J. Jacobson, 1993  Strains for identifying and studying vegetative (heterokaryon) incompatibility loci in Neurospora crassa.  Fungal Genet. Newsl. 40:69-73.

318. Turner, B. C., and A. Fairfield, 1993  Previously reported putative new species is a subgroup of Neurospora sitophila.  Fungal Genet. Newsl. 40:84.

319. Turner, B. C., and D. D. Perkins, 1993  Strains for studying Spore killer elements in four Neurospora species.  Fungal Genet. Newsl. 40:76-78.  (See corrections in Fungal Genet. Newsl. 41:14, 1994.)

1994

320.  Perkins, D. D., 1994  How should the infertility of interspecies crosses be designated?  Mycologia 86:758-761.

321.  Perkins, D. D., 1994  Deviations from 1 : 1 and numbers of progeny necessary for establishing linkage.  Fungal Genet. Newsl. 41:69-70.

322.  Perkins, D. D., 1994  Neurospora tetrasperma bibliography.  Fungal Genet. Newsl. 41:69-78.

323.  Perkins, D. D., 1994  Neurospora tetrasperma helper strains using the gene E.  Fungal Genet. Newsl. 41:71.

324.  Pollard, V. C., and D. D. Perkins, 1994  Convenient scoring of deoxyglucose resistance in Neurospora.  Fungal Genet. Newsl. 41:86.

325. Raju, N. B.,  1994  Ascomycete Spore killers:  Chromosomal elements that distort genetic ratios among the products of meiosis.  Mycologia 86:461-473.

326. Raju, N. B.,  1994  Spore killers in ascomycetes, that distort genetic ratios among the products of meiosis.  Fifth International Mycological Congress Abstracts, p.176.

327. Raju, N. B., and D. D. Perkins, 1994  Diverse programs of ascus development in pseudohomothallic species of Neurospora, Gelasinospora and Podospora.  Develop. Genet. 15:104-118.

1995

328  Jacobson, D. J., 1995  Sexual dysfunction associated with outcrossing in Neurospora tetrasperma, a pseudohomothallic ascomycete.  Mycologia 87:604-617.

329.  Perkins, D. D.,  1995  Neurospora chromosome rearrangements with mutant phenotype provide an opportunity to sequence breakpoint junctions.  Fungal Genet. Newsl. 42:59-61.

330.  Perkins, D. D., B. C. Turner, E. G. Barry, and V. C. Pollard, 1995  Cytogenetics of an intrachromosomal transposition in Neurospora. Chromosoma 104:260-273.

331.  Perkins, D. D., N. B. Raju, E. G. Barry, and D. K. Butler,  1995  Chromosome rearrangements that involve the nucleolus organizer region in Neurospora.  Genetics 141:909-923.

332.  Perkins, D. D., and N. B. Raju, 1995  Three-to-one-segregation from reciprocal translocation quadrivalents in Neurospora and its bearing on the interpretation of spore-abortion patterns in unordered asci.  Genome 38:661-672.

1996

333. Barry, E. G.  1996  Uniparental progeny in Neurospora crassa.  Fungal Genet. Newsl. 43:14.

334. Barry, E. G.  1996  Fungal Chromosomes.  J. Genet. 75:255-263.

335.  Perkins, D. D.  1996.  Recommendations regarding Neurospora genetic nomenclature.  Fungal Genet. Newsl. 43:73-75.

336.  Perkins, D. D.  1996.  Methods for extracting markers from Spore killer strains of Neurospora crassa. Fungal Genet. Newsl. 43:43-44.

337. Raju, N. B.  1996.  Meiotic drive in fungi:  Chromosomal elements that cause fratricide and distort genetic ratios.  J. Genet.  75:287-296.

1997

338. Leslie, J. F., and C. T. Yamashiro.  1997.  Effects of the tol mutation on allelic interactions at het loci in Neurospora crassa.  Genome 40:834-840.

339. Natvig, D. O., D. J. Jacobson, M. P. Skupski, and A. Gallegos.  1997.  Pseudohomothallism and evolution of  Neurospora tetrasperma.  19th Fungal Genetics Conference, Asilomar. p. 6. (Abstr.)

340.  Perkins, D. D.  1997.  Chromosome rearrangements in Neurospora and other filamentous fungi.  Advan. Genet. 36:239-398.

341.  Perkins, D. D., B. S. Margolin, E. U. Selker, and S. D. Haedo.  1997.  Occurrence of repeat induced point mutation in long segmental duplications of Neurospora.  Genetics 147:125-136.

342. Smith, M.L., N. Mir-Rashed, C. O. Micali, S. P. Godkin, D. J. Jacobson, and N. L. Glass.  1997.  Genetics of two incompatibility genes at het-6 in Neurospora crassa. 19th Fungal Genetics Conference, Asilomar. p. 62. (Abstr.)

1998

343.   Barry, E. G.  1998.  Chromosome rearrangements that will not follow the rules. Neurospora 1998 (Asilomar Conference). p. 10. (Abstr.)

344.  Goodrich-Tanrikulu, M., D. Jacobson, S. Schwartz, W. D. Stuart, A. Stafford, J.-T. Lin, and T. McKeon.  1998.  RIP of a homolog of the Saccharomyces cerevisiae gene for the beta subunit of fatty acid synthase yields cel-like mutants.  Neurospora 1998 (Asilomar Conference). p. 20. (Abstr.)

345.  Kuldau, G.A., N. B. Raju, and N. L. Glass.  1998.  Repeat-induced point mutations in Pad-1, a putative RNA splicing factor from Neurospora crassa, confer dominant lethal effects on ascus development.  Fungal Genet. Biol. 23:169-180.

346. Raju, N. B.  1998.  A quick silver-staining method for conidial nuclei, and its usefulness for studying the behavior of the nucleolus organizer in Neurospora. Neurospora 1998 (Asilomar Conference). p. 25. (Abstr.)

1999

346a  Goodrich-Tanrikulu, M., A. E. Stafford, and D. J. Jacobson. 1999. A systematic survey of the fatty acid composition of Neurospora strains.  Fungal Genet. Newslett. 46:8.

347.  Goodrich-Tanrikulu, M., D. J. Jacobson, A. E. Stafford, J.-T. Lin, and T. A. McKeon. 1999.  Characterization of Neurospora crassa mutants isolated following repeat-induced point mutation of the b-subunit of fatty acid synthase. Curr. Genet.  36:147-152.

348.  Perkins, D. D.  1999.  Neurospora genetic nomenclature.  Fungal Genet. Newslett. 46:34-41.

349.  Perkins, D. D., A. Radford, and M. S. Sachs.  1999.  A new compendium of Neurospora chromosomal loci. Fungal Genet. Newslett. 46 (Suppl.):60. (Abstr.)

350. Powell, A. J., G. S. Saenz, J. G. Stam, D. J. Jacobson, and D. O. Natvig.  1999.  Allelic diversity at the het-c locus of Neurospora tetrasperma poses an evolutionary dilemma. Fungal Genet. Newslett. 46 (Suppl.):87. (Abstr.)

351. Raju, N. B., and D. J. Jacobson.  1999. Incomplete chromosome pairing is correlated with a recombination block on the mating-type chromosome of Neurospora tetrasperma. Fungal Genet. Newslett. 46 (Suppl.):87. (Abstr.)

352. Raju, N. B., and D. D. Perkins.  1999.  Programmed ascospore death in the homothallic ascomycete Coniochaeta tetraspora. Fungal Genet. Newslett. 46 (Suppl.):88. (Abstr.)

353. Taylor, J. W., Jacobson, D. J., and Fisher, M. C. 1999. The evolution of asexual fungi: reproduction, speciation, and classification.  Ann. Rev. Phytopathology 37:197-246.

2000

354. Barry, E. G.  2000. Detached nuclear genes of Neurospora transmitted cytoplasmically through infectious contact.  Fungal Genet  Newslett.  47 (Suppl.):13. (Abstr.)

355.  Gallegos, A., D. J. Jacobson, N. B. Raju, M. P. Skupski, and D. O. Natvig. 2000. Suppressed recombination and a pairing anomaly on the mating-type chromosome of Neurospora tetraspora. Genetics 154:623-633.

356. Glass, N. L., Jacobson, D. J., and Shiu, P. K. T. 2000.  The genetics of hyphal fusion and vegetative incompatibility in filamentous ascomycete fungi.  Ann. Rev. Genet. 34:165-186.

357.  Metzenberg, R. L., and N. B. Raju.  2000.  Suppression of certain ascus-dominant mutations.  Fungal Genet. Newslett. 47  (Suppl.):12. (Abstr.)

358.  Metzenberg, R. L., Jacobson, D. J., and Bertrand, H. 2000. Making the selective agent for the Bar plasmids, phosphinothricin (glufosinate) affordable for routine use.  Fungal Genet. Newslett. 47:79-80.

359. Mir-Rashed, N., Jacobson, D. J., Dehghany, M. R., Micali, O. C., and Smith, M. L.  2000. Molecular and functional analyses of incompatibility genes at het-6 in a population of Neurospora crassa. Fungal Genet. Biol. 30:197-205.

360.  Nelson, M. A., and D. D. Perkins.  2000. Restriction polymorphism maps of Neurospora crassa: 2000 update. Fungal Genet. Newslett. 47:25-39.

361.  Perkins, D. D.  2000.  Celebrating 75 years of Neurospora genetics.  Fungal Genet. Newslett. 47 (Suppl.):6. (Abstr.)

362.  Perkins, D. D. 2000.  Neurospora genetics at the turn of the century. Fungal Genet. Newslett. 47:83-88.

363.  Perkins, D. D.  2000.  Neurospora crassa genetic maps.  Fungal Genet. Newslett. 47:40-58.

364.  Perkins, D. D., and R. H. Davis.  2000.  Evidence for safety of Neurospora species for academic and commercial uses.  Appl. Environ. Microbiol. 66:5107-5109.

365.  Perkins, D. D., and R. H. Davis.  2000.  Neurospora at the millennium. Fungal Genet. Biol. 31:153-167.

366. Raju, N. B., and D. D. Perkins. 2000.  Programmed ascospore death in the homothallic ascomycete Coniochaeta tetrasperma.  Fungal Genet. Biol.  30:213-221.

367. Smith, M. L., S. P. Hubbard, D. J. Jacobson, O. C. Micali, and N. L. Glass.  2000. An osmotic-remedial, temperature-sensitive mutation in the allosteric activity site of ribonucleotide reductase in Neurospora crassa. Mol. Gen. Genet. 262:1022-1035.

368. Smith, M. L., O. C. Micali, S. P. Hubbard, N. Mir-Rashed, D. J. Jacobson, and N. L. Glass.  2000. Vegetative incompatibility in the het-6 region of Neurospora crassa is mediated by two linked genes.  Genetics 155: 1095-1104.

369. Taylor, J. W., D. J. Jacobson, S. Kroken,T. Kasuga, D. M. Geiser, D. S. Hibbett, and M. C. Fisher.  2000.  Phylogenetic species recognition and species concepts in fungi. Fungal Genet. Biol. 31:21-32.

2001

370.  Jacobson, D. J., M. M. Barton, J. R. Dettman, M. D. Hiltz, A. J. Powell, G. S. Saenz, J. W. Taylor, N. L. Glass, and D. O. Natvig. 2001.  Neurospora in western North America: A model system in the backyard.  Fungal Genet. Newsl. 48 (Suppl.):62. (Abstr.)

371.  Jacobson, D. J., M. M. Barton, J. R. Dettman,  A. J. Powell, G. S. Saenz, J. C. Hirsch, J. W. Taylor, N. L. Glass, and D. O. Natvig. 2001.  Neurospora in western North America: A model system in the backyard.  Mycologia 52 (Suppl.) (“Inoculum”):41. (Abstr.)

372.  Perkins, D. D.  2001. Fungal genome rearrangements in the new era. Fungal Genet. Newsl. 48 (Suppl.):33. (Abstr.)

373.  Perkins, D. D., A. Radford, and M. S. Sachs.  2001.  The Neurospora Compendium: Chromosomal Loci.  Academic Press, San Diego.

374. Powell, A. J., D. J. Jacobson, and D. O. Natvig.  2001. Allelic diversity at the het-c locus in Neurospora tetrasperma confirms outcrossing in nature and poses an evolutionary dilemma for pseudohomothallic ascomycetes.  J. Mol. Evol. 52:94-102.

375. Raju, N. B.  Meiosis and ascospore development in nonlinear asci of Neurospora pannonica. Fungal Genet. Newsl. 48 (Suppl.):142. (Abstr.)

376. Raju, N. B., and A. G. Burk.  2001. The genetic basis of abnormal ascospore morphology in Neurospora. Fungal Genet. Newsl. 48 (Suppl.):142. (Abstr.)

377. Saenz, G. S., J. G. Stam, D. J. Jacobson, and D. O. Natvig. 2001. Heteroallelism at the het-c locus contributes to sexual dysfunction in outcrossed strains of Neurospora tetrasperma. Fungal Genet. Biol. 34:123-129.

378. Shiu, P. K. T., N. B. Raju, D. Zickler, and R. L. Metzenberg. 2001.  Meiotic silencing by unpaired DNA. Cell 107:905-916.

379. Turner, B. C. 2001. Geographical distribution of Spore killer meiotic drive strains and of strains resistant to killing in Neurospora. Fungal Genet. Biol. 32:93-104.

380. Turner, B. C., and D. D. Perkins. 2001. Neurospora from natural populations.  A global study.  Fungal Genet. Biol. 32:67-92.

2002

381. Davis, R. H:., and D. D. Perkins. 2002.  Neurospora: A model of model microbes.  Nature Genetics Reviews 3:7-13.

382.  Jacobson, D. J., A. J. Powell, J. R.. Dettman, G. S. Saenz,  M. M. Barton, M. D. Hiltz, N. L. Glass, J. W. Taylor, and D. O. Natvig. 2002.  Neurospora in western North America:  Fungal Genet. Newslett. 49 (Suppl.):20. (Abstr.)

383.  Perkins, D. D. 2002.  Neurospora perithecia: The first sighting.  Fungal Genet. Newslett.49:9-10.

384.  Perkins, D. D. 2002.  Corrections to the Neurospora Compendium.  Fungal Genet. Newslett.49:17.

385.  Perkins, D. D., and R. H. Davis. 2002. Neurospora chronology -- 1843-2002.  Fungal Genet. Newslett. 49:4-8.

386. Raju, N. B. 2002. Meiosis and ascospore development in nonlinear asci of Neurospora pannonica. Mycologia 94:99-104.

387. Raju, N. B. 2002. Spore killers: Meiotic drive elements that distort genetic ratios. In Molecular Biology of Fungal Development. (H. D. Osiewacz, Ed.), pp. 275-296.  Marcel Decker, New York.

2003

388. Bistis, G. N., D. D. Perkins,  and N. D. Read. 2003. Different cell types in Neurospora crassa. Fungal Genet. Newslett. 50: 17-19.

389. J, E. Galagan, S. E. Calvo, K. A. Borkovich, E. U. Selker, N. D. Read, W. FitzHugh5, L.-J. Ma, S. Smirnov, S. Purcell, B. Rehman, T. Elkins, R. Engels, S. Wang, C. B. Nielsen, J. Butler, D. Jaffe, M. Endrizzi, D. Qui, P. Ianakiev., D. Bell-Pedersen, M. A. Nelson, M. Werner-Washburne, C. P. Selitrennikoff, J. A. Kinsey, E. L. Braun, A. Zelter, U. Schulte, G. O. Kothe, G. Jedd, W. Mewes, C. Staben, E. Marcotte, D. Greenberg, A. Roy, K. Foley, J. Naylor, N. Stange-Thomann, R. Barrett, S. Gnerre, M. Kamal, M. Kamvysselis, C. Bielke, S. Rudd, D. Frishman, S. Krystofova, C. Rasmussen, R. L. Metzenberg, D. D. Perkins, S. Kroken, D. Catcheside, W. Li , R. J. Pratt, S. A. Osmani, C. P.C. DeSouza, L. Glass, M. J. Orbach, J. A. Berglund, R. Voelker, O. Yarden, M. Plamann, S. Seiler, J. Dunlap, A. Radford, R. Aramayo, D. O. Natvig, L. A. Alex, G. Mannhaupt, D.lJ. Ebbole, M. Freitag, I. Paulsen, M. S. Sachs, E. S. Lander, C. Nusbaum, and and Bruce Birren. 2003. The genome sequence of the filamentous fungus Neurosporacrassa.  Nature 422:859-868..

390.  Dettman, J. R., D. J. Jacobson and J. W. Taylor. 2003. Phylogenetic species recognition in Neurospora. (Abstr.)

391.  Dettman, J. R., D. J. Jacobson and J. W. Taylor. 2003. A multilocus geneological approach to phylogenetic species recognition in the model eukaryote Neurospora.  Evolution 57:2703-2720.

392.  Dettman, J. R., D. J. Jacobson, E. Turner, A. Pringle, and J. W. Taylor. 2003. Reproductive isolation and phylogenetic divergence in Neurospora:  Comparing methods of species recognition in a model eukaryote.  Evolution 57:2721-2741.

394.  Jacobson, D. J. 2003. Will European forest fires favour Neurospora ascomata?  Mycol. Res. 107:1250-1251.

395.  Jacobson, D. J., W. H. Dvorachek, and D. O. Natvig. 2003. Sympatric biological and phylogenetic species among pseudohomothallic isolates identified as Neurospora tetrasperma.  Fungal Genet. Newslett. 50 (Suppl.):144.  (Abstr.)

396.  Newmeyer, D., and D. D. Perkins 2003  Raymond W. Barratt, 1920-2002. Fungal Genet. Newslett. 50:20.

397.  Perkins, D. D. 2003. A fratricidal fungal prion. Proc. Nat. Acad. Sci. USA 100:6292-6294.

398.  Perkins, D. D. 2003. Neurospora tetrasperma bibliography -- Additions. Fungal Genet. Newslett. 50:24-26.

399.  Perkins, D. D. 2003. Alexandra Putrament, 1926-2003. Fungal Genet.Newslett. 50:21.

400..  Perkins, D. D. 2003. Waclaw Gajewski, 1911-1997. Fungal Genet.Newslett. 50:21.

401.  Perkins, D. D. 2003. Morphological mutants of Neurospora crassa. I. From sequence to phenotype in Neurospora morphogenesis. Fungal Genet.Newslett. 50 (Suppl.):71. (Abstr.)

402. Powell, A. J., D. J. Jacobson, L Salter, and D. O. Natvig. 2003. Variation among natural isolates of Neurospoora on small spatial scales. Mycologia 95:809-819.

403. Raju, N. B., M. Freitag, and R. L. Metzenberg. 2003. Expression of a GFP-tagged histone H1 gene during ascus development in Neurospora crassa. Fungal Genet.Newslett. 50 (Suppl.):50. (Abstr.)

404. Saenz, G. S., D. J. Jacobson, W. D. Dvorachek, Jr., and D. O. Natvig  2003. Sympatric biological and phylogenetic species among pseudohomothallic isolates identified as Neurospora tetrasperma. Fungal Genet.Newslett. 50 (Suppl):144. (Abstr.)

405. Turner, B. C.  2003. Analysis of two additional loci in Neurospora crassa related to Spore killer-2.  Fungal Genet. Biol. 39:142-150.

2004

406.  Dettman, J., D. Jacobson, and J. Taylor. 2004. Phylogenetic relationships within the diverse Neurospora discreta species complex. Fungal Genet.Newslett. 51 (Suppl):35. (Abstr.)

407. Freitag, M., P. C. Hickey, N. B. Raju, E. U. Selker, and N. D. Read. 2004. GFP as a tool to analyze the organization, dynamics, and function of nuclei and microtubules in Neurospora crassa. Fungal. Genet. Biol. 41: 897-910.

408.  Jacobson, D. J. 2004. Will European forest fires favour Neurospora ascomata?  Mycol. Res. 107:1250-1251.

409.  Jacobson, D., C. Boesl, S. Sultana, T. Roenneberg, M. Merrow, M. Duarte, I. Marques, A. Ushakova, P. Carneiro, A. Videira, D. O. Natvig, and J. Taylor. 2004. What we know about regional diversity in Neurospora. Fungal Genet.Newslett. 51 (Suppl):9. (Abstr.)

410.  Jacobson, D. J., A. J. Powell, J. R. Dettman, G. S. Saenz, M. M. Barton, M. D. Hiltz, W. H. Dvorachek, Jr., N. L. Glass,  J. W., Taylor, and D. O. Natvig. 2004.  Neurospora in temporate forests of western North America. Mycologia 96:66-74.

411.  Perkins, D. D. 2004. Neurospora comes into its own. Fungal Genet.Newslett. 51 (Suppl):6. (Abstr.)

412.  Perkins, D. D. 2004. Wild type Neurospora crassa strains preferred for use as standards. Fungal Genet.Newslett. 51:7-8.

413. Raju, N. B., and D. J. Jacobson. 2004.  Characterization of meiotic silencing by unpaired DNA (MSUD) in Neurospora tetrasperma. Fungal Genet.Newslett. 51 (Suppl):22. (Abstr.)

414. Raju, N. B., and A. G. Burk. 2004. Abnormal ascospore morphology in the bud mutant of Neurospora tetrasperma.. Fungal Genet. Biol. 41: 582-589.

415. Taylor, J. W., T. Kasuga, L. B. Gilbert, J. Townsend, J. Dettman,  D. Jacobson,  A. Pringle, E. Turner, D. Natvig, and L. Glass. 2004. The genetic basis of adaptation: How good it's gonna be. Fungal Genet.Newslett. 51 (Suppl):8. (Abstr.)

416. Tan, Y., Z. Dragovic, C. Boesl, S. Sultana, D. Jacobson, T. Roenneberg, and M. Merrow.  2004. Photoperiodism in Neurospora crassa. Fungal Genet.Newslett. 51 (Suppl):9. (Abstr.)

2005

417.   Fleissner, A., S. Sarkar, D. J. Jacobson, M. G. Roca, N. D. Read, and N. L. Glass. 2005. The so locus is required for vegetative cell fusion and postfertilization evens in Neurospora crassa. Eukaryotic Cell 4: 920-930..

418.   Jacobson, D. J.  2005  Blocked recombination along the mating-type chromosomes of Neurospora tetrasperma involves both structural heterozygosity and autosomal genes.  Genetics 171:839-843..

419.    Jacobson, D., and N. Raju. 2005. The absence of meiotic silencing by unpaired DNA (MSUD) in Neurospora tetrasperma. Fungal Genet. Newslett. 52 (Suppl.):45. (Abstr. 24)

420.    Jacobson, D., D. Boesl, S. Sultana, T. Roenneberg, M. Merrow, R. Adams, J. Dettman, M. Duarte, I. Marques, A. Ushakova, P. Carneiro, A. Videira, L. Navarro-Sampedro, M. Olmedo, L. M. Corrochano, D. O. Natvig, and J. Taylor. 2005. New findings of Neurospora in Europe and comparisons of diversity in temperate climates on continental scales.  pp. 131-132 in MSA/MSJ Joint Meeting 2005 "Hyphal Bridges over the Pacific: Advancing Mycology". (Abstr.)

421.   Perkins, D. D. 2005. Why "Red bread mold" is an inappropriate name for Neurospora.Fungal Genet. Newslett. 52: 7-8.

422.   Raju, N. B. 2005  Web-based illustrations of the Neurospora sexual biology.. Fungal Genet. Newslett. 52 (Suppl.):51. (Abstr. 47)

423.   Raju, N. B., M. Freitag, and R. L. Metzenberg. 2005. Visualization of meiotic silencing by unpaired DNA (MSUD) using GFP-tagged histone H1 and ß-tubulin in Neurospora crassa. Fungal Genet. Newslett. 52 (Suppl.):51. (Abstr. 48)

424.   Raju, N. B., P. K. T. Shiu, and R. L. Metzenberg. 2005. The suppression of meiotic silencing by Spore killers Sk-2 and Sk-3 in Neurospora crassa. . Fungal Genet. Newslett. 52 (Suppl.): 52. (Abstr. 49)

425.   Selker, E. U., R. H. Davis, and D. D. Perkins. 2005. The 2005 Thomas Hunt Morgan Medal:  Robert L. Metzenberg.   Genetics 169:503-505.

426.   Sultana, S., T. Roenneberg, D. Jacobson, and M. Merrow. 2005.  The distribution of chronotypes in Neurospora crassa. Fungal Genet. Newslett. 52 (Suppl.):213.  (Abstr.590)

427.     Turner, E., D. J. Jacobson, and J. W. Taylor. 2005.  Partitioning reproductive isolation in Neurospora: Measuring the strength of component reproductive isolation barriers and their relative contributions to isolation between species. Fungal Genet. Newslett. 52 (Suppl.): 74. (Abstr. 125)

428.     Turner, E., D. J. Jacobson, and J. W. Taylor. 2005.  Reinforcement of reproductive isolation barriers in Neurospora: Selective advantage and genetic basis of the early abortion of hybrid perithecia. Fungal Genet. Newslett. 52 (Suppl.):74. (Abstr. 126)

2006

429.     Shiu, P. K. T., D. Zickler, N. B. Raju, G. Ruprick-Robert, and R. L. Metzenberg. 2006. SAD-2 is required for meiotic silencing by unpaired DNA and perinuclear localization of SAD-1 RdRP.  Proc. Nat. Acad. Sci. USA 103: 2243-2248.

430.    Dettman, J. R., D. J. Jacobson, and J. W. Taylor. 2006. Multilocus sequence data reveal extensive, phylogenetic species diversity within the Neurospora discreta complex.  Mycologia 98:436-446.

431.    Jacobson, D. J.,  J. R. Dettman, R. Adams, C. Boesl, S. Sultana, T. Roenneberg, M. Merrow, M. Duarte, I. Marques, A. Ushakova, P. Carneiro, A. Videira, L. Navarro-Sampedro, M. Olmedo, L. M. Corrochano, and J. W. Taylor.  2006. New findings of Neurospora in Europe and comparisons of diversity in temperate climates on continental scales. Mycologia 98:550-559.

432.    Taylor, J. W., E. Turner, J. P. Townsend, J. R. Dettman, and D. J. Jacobson. 2006. Eurkaryotic microbes can be geographically limited when species are recognized correctly: Examples from the kingdom Fungi. Philosophical Transactions of the Royal Society B. 361:1947-1963.

2007

433.    Perkins, D. D., M. Freitag, V. C. Pollard, L. A. Bailey-Shrode, E. U. Selker, and D. J. Ebbole. 2007. Recurrent locus-specific mutation resulting from a cryptic ectopic insertion in Neurospora. Genetics 175: 527–544.

434.    Raju, N. B., R. L. Metzenberg, and P. K. Shiu. 2007. Neurospora Spore killers Sk-2 and Sk-3 suppress meiotic silencing by unpaired DNA. Genetics (published ahead of print on March 4, 2007 as doi: 10.1534/genetics.106.069161).

Powell, A. J., D. J. Jacobson, and D. O. Natvig. 2007. Allelic variation at het-6 and un-24 in a global sample of Neurospora tetrasperma. Fungal Genetics and Biology (in press)

Jacobson, D. J., N. B. Raju and M. Freitag. 2007. The absence of meiotic silencing by unpaired DNA in Neurospora tetrasperma. Genetics (submitted)

Saenz, G. S., D. J. Jacobson, W. H. Dvorachek, Jr., and D. O. Natvig. Sympatric biological and phylogenetic species among pseudohomothallic isolates identified as Neurospora tetrasperma.  (In preparation).

*****

Work in this laboratory was supported by Research Grant AI-01462 from the National Institutes of Health, U.S. Public Health Service from 1956 to1998, by N.I.H. Research Career Award K6-GM4899 from 1964 to 1989, and by N.S.F. Grants MCB-9728675, MCB-0235698, and MCB-0417282 since 1998.

This page was updated on 6 March 2007.

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