Bibliography
2004
Burgos
M, DeRiemer K, Small PM, Hopewell PC, Daley CL.
J Infect Dis. 2004 Aug 1;190(3):650-1. No abstract available.
Goguet
de la Salmoniere YO, Kim CC, Tsolaki AG, Pym AS, Siegrist MS, Small PM.
High-throughput method for detecting genomic-deletion polymorphisms.
J Clin Microbiol. 2004 Jul;42(7):2913-8.
Ponce-De-Leon
A, Garcia-Garcia Md Mde L, Garcia-Sancho MC, Gomez-Perez FJ, Valdespino-Gomez
JL, Olaiz-Fernandez G, Rojas R, Ferreyra-Reyes L, Cano-Arellano B, Bobadilla M,
Small PM, Sifuentes-Osornio J.
Tuberculosis and diabetes in southern Mexico.
Diabetes Care. 2004 Jul;27(7):1584-90.
Hirsh
AE, Tsolaki AG, DeRiemer K, Feldman MW, Small PM.
Stable association between strains of Mycobacterium tuberculosis and their
human host populations.
Proc Natl Acad Sci U S A. 2004 Apr 6;101(14):4871-6. Epub 2004 Mar 23.
Tsolaki
AG, Hirsh AE, DeRiemer K, Enciso JA, Wong MZ, Hannan M, Goguet de la Salmoniere
YO, Aman K, Kato-Maeda M, Small PM.
Functional and evolutionary genomics of Mycobacterium tuberculosis: insights
from genomic deletions in 100 strains.
Proc Natl Acad Sci U S A. 2004 Apr 6;101(14):4865-70. Epub 2004 Mar 15.
de
Jong BC, Israelski DM, Corbett EL, Small PM.
Clinical management of tuberculosis in the context of HIV infection.
Annu Rev Med. 2004;55:283-301. Review.
2003
Burgos
M, DeRiemer K, Small PM, Hopewell PC, Daley CL.
Effect of drug
resistance on the generation of secondary cases of tuberculosis.
J Infect Dis. 2003 Dec 15; 188(12): 1878-84. Epub 2003 Dec 09.
Mostowy
S, Tsolaki AG, Small PM, Behr MA.
The in vitro
evolution of BCG vaccines.
Vaccine. 2003 Oct 1; 21(27-30): 4270-4.
Rapid
identification and susceptibility testing of Mycobacterium tuberculosis from
MGIT cultures with luciferase reporter mycobacteriophages.
J Med Microbiol. 2003 Jul; 52(Pt 7): 557-61.
The
private-public divide: impact of conflicting perceptions between the private
and public health care sectors in India.
Int J Tuberc Lung Dis. 2003 Jun; 7(6): 543-9.
2002
Kivi
M, Liu X, Raychaudhuri S, Altman RB, Small PM.
Determining the
Genomic Locations of Repetitive DNA Sequences with a Whole-Genome Microarray:
IS6110 in Mycobacterium tuberculosis.
J Clin Microbiol. 2002 Jun;40(6):2192-8
2001
rpoB Gene
mutations in rifampin-resistant Mycobacterium tuberculosis identified by
polymerase chain reaction single-stranded conformational polymorphism. Emerg Infect Dis. 2001
Nov-Dec;7(6):1010-3.
Porco
TC, Small PM, Blower SM.
Amplification
dynamics: predicting the effect of HIV on tuberculosis outbreaks.
J Acquir Immune Defic Syndr. 2001 Dec 15;28(5):437-44.
Kato-Maeda
M, Gao Q, Small PM.Microarray analysis of pathogens and their interaction
with hosts.
Cell Microbiol. 2001 Nov;3(11):713-9. Review.
Luciferase
reporter mycobacteriophages for detection, identification, and antibiotic
susceptibility testing of Mycobacterium tuberculosis in Mexico.
J Clin Microbiol. 2001 Nov;39(11):3883-8.
[Drug resistance
of Mycobacterium tuberculosis in Orizaba, Veracruz. Implications for the
tuberculosis prevention and control program]
Rev Invest Clin. 2001 Jul-Aug;53(4):315-23. Spanish.
Management of
tuberculosis in the United States.
N Engl J Med. 2001 Jul 19;345(3):189-200. Review. No abstract available.
User's guide to
tuberculosis resources on the internet.
Clin Infect Dis. 2001 Jun 1;32(11):1580-8.
Kato-Maeda
M, Rhee JT, Gingeras TR, Salamon H, Drenkow J, Smittipat N, Small PM.
Comparing genomes
within the species Mycobacterium tuberculosis.
Genome Res. 2001 Apr;11(4):547-54.
Exogenous
reinfection with tuberculosis on a European island with a moderate incidence of
disease.
Am J Respir Crit Care Med. 2001 Mar;163(3 Pt 1):717-20.
Kato-Maeda
M, Bifani PJ, Kreiswirth BN, Small PM.
The nature and
consequence of genetic variability within Mycobacterium tuberculosis.
J Clin Invest. 2001 Mar;107(5):533-7. Review. No abstract available.
2000
Mycobacterium
tuberculosis drug resistance in a suburban community in southern Mexico.
Int J Tuberc Lung Dis. 2000 Dec;4(12 Suppl 2):S168-70.
Rhee
JT, Tanaka MM, Behr MA, Agasino CB, Paz EA, Hopewell PC, Small PM.Use of
multiple markers in population-based molecular epidemiologic studies of
tuberculosis.
Int J Tuberc Lung Dis. 2000 Dec;4(12):1111-9.
DeRiemer
K, Garcia Garcia ML, Ponce de Leon Garduno A, Sifuentes Osornio J, Small PM.
Classification of
drug-resistant tuberculosis.
Lancet. 2000 Dec 2;356(9245):1931-2. No abstract available.
Salamon
H, Kato-Maeda M, Small PM, Drenkow J, Gingeras TR.
Detection of
deleted genomic DNA using a semiautomated computational analysis of GeneChip
data.
Genome Res. 2000 Dec;10(12):2044-54.
Liu
YP, Behr MA, Small PM, Kurn N.
Genotypic
determination of Mycobacterium tuberculosis antibiotic resistance using a novel
mutation detection method, the branch migration inhibition M. tuberculosis
antibiotic resistance test.
J Clin Microbiol. 2000 Oct;38(10):3656-62.
More rigour
needed in trials of new diagnostic agents for tuberculosis.
Lancet. 2000 Sep 23;356(9235):1048-9. No abstract available.
Raychaudhuri
S, Stuart JM, Liu X, Small PM, Altman RB.Pattern recognition of genomic
features with microarrays: site typing of Mycobacterium tuberculosis strains.
Proc Int Conf Intell Syst Mol Biol. 2000;8:286-95.
A current
approach to the management of tuberculosis infection.
Curr Clin Top Infect Dis. 2000;20:209-31. Review. No abstract available.
Moss
AR, Hahn JA, Tulsky JP, Daley CL, Small PM, Hopewell PC.
Tuberculosis in
the homeless. A prospective study.
Am J Respir Crit Care Med. 2000 Aug;162(2 Pt 1):460-4.
How molecular
epidemiology has changed what we know about tuberculosis.
West J Med. 2000 Apr;172(4):256-9. Review. No abstract available.
Borgdorff
MW, Behr MA, Nagelkerke NJ, Hopewell PC, Small PM.
Transmission of
tuberculosis in San Francisco and its association with immigration and ethnicity.
Int J Tuberc Lung Dis. 2000 Apr;4(4):287-94.
Clinical
consequences and transmissibility of drug-resistant tuberculosis in southern
Mexico.
Arch Intern Med. 2000 Mar 13;160(5):630-6.
Tanaka
MM, Small PM, Salamon H, Feldman MW.
The dynamics of
repeated elements: applications to the epidemiology of tuberculosis.
Proc Natl Acad Sci U S A. 2000 Mar 28;97(7):3532-7.
Salamon
H, Behr MA, Rhee JT, Small PM.Genetic distances for the study of infectious
disease epidemiology.
Am J Epidemiol. 2000 Feb 1;151(3):324-34.
Martinez
AN, Rhee JT, Small PM, Behr MA.
Sex differences
in the epidemiology of tuberculosis in San Francisco.
Int J Tuberc Lung Dis. 2000 Jan;4(1):26-31.
The role of core
groups in transmitting Mycobacterium tuberculosis in a high prevalence community
in Southern Mexico.
Int J Tuberc Lung Dis. 2000 Jan;4(1):12-7.
1999
Tuberculosis in
the 21st century: DOTS and SPOTS. Plenary lecture given at the 29th World
Conference of the International Union Against Tuberculosis and Lung Disease,
Bangkok, Thailand, 23-26 November 1998. Directly observed therapy.
Int J Tuberc Lung Dis. 1999 Nov;3(11):949-55.
Exogenous
reinfection in tuberculosis.
N Engl J Med. 1999 Oct 14;341(16):1226-7. No abstract available.
Chaparro
SV, Montoya JG, Keeffe EB, Rhee JT, Small PM.
Risk of
tuberculosis in tuberculin skin test-positive liver transplant patients.
Clin Infect Dis. 1999 Jul;29(1):207-8. No abstract available.
A molecular
epidemiologic analysis of tuberculosis trends in San Francisco, 1991-1997.
Ann Intern Med. 1999 Jun 15;130(12):971-8.
Behr
MA, Wilson MA, Gill WP, Salamon H, Schoolnik GK, Rane S, Small PM.
Comparative
genomics of BCG vaccines by whole-genome DNA microarray.
Science. 1999 May 28;284(5419):1520-3.
Singh
SP, Salamon H, Lahti CJ, Farid-Moyer M, Small PM.
Use of
pulsed-field gel electrophoresis for molecular epidemiologic and population
genetic studies of Mycobacterium tuberculosis.
J Clin Microbiol. 1999 Jun;37(6):1927-31.
Rhee
JT, Piatek AS, Small PM, Harris LM, Chaparro SV, Kramer FR, Alland D.
Molecular
epidemiologic evaluation of transmissibility and virulence of Mycobacterium
tuberculosis.
J Clin Microbiol. 1999 Jun;37(6):1764-70.
Tuberculosis
epidemiology and control in Veracruz, Mexico.
Int J Epidemiol. 1999 Feb;28(1):135-40.
A historical and
molecular phylogeny of BCG strains.
Vaccine. 1999 Feb 26;17(7-8):915-22.
Behr
MA, Warren SA, Salamon H, Hopewell PC, Ponce de Leon A, Daley CL, Small PM.
Transmission of
Mycobacterium tuberculosis from patients smear-negative for acid-fast bacilli.
Lancet. 1999 Feb 6;353(9151):444-9
1998
Differences in
contributing factors to tuberculosis incidence in U.S. -born and foreign-born
persons.
Am J Respir Crit Care Med. 1998 Dec;158(6):1797-803.
Behr
MA, Hopewell PC, Paz EA, Kawamura LM, Schecter GF, Small PM.
Predictive value
of contact investigation for identifying recent transmission of Mycobacterium
tuberculosis.
Am J Respir Crit Care Med. 1998 Aug;158(2):465-9.
Harrow
EM, Rangel JM, Arriega JM, Cohen I, Regil Ruiz MI, DeRiemer K, Small PM.
Epidemiology and
clinical consequences of drug-resistant tuberculosis in a Guatemalan hospital.
Chest. 1998 Jun;113(6):1452-8.
PMID: 9631777 [PubMed - indexed for MEDLINE]
Agasino
CB, Ponce de Leon A, Jasmer RM, Small PM.
Epidemiology of
Mycobacterium tuberculosis strains in San Francisco that do not contain IS6110.
Int J Tuberc Lung Dis. 1998 Jun;2(6):518-20.
Salamon
H, Segal MR, Ponce de Leon A, Small PM.
Accommodating
error analysis in comparison and clustering of molecular fingerprints.
Emerg Infect Dis. 1998 Apr-Jun;4(2):159-68.
Salamon H, Segal MR, Ponce de Leon A, Small PM.
Accomodating
Error Analysis in Comparison and Clustering of Molecular Fingerprints: Erratum.
Emerg Infect Dis
1998 Jul;4(3):515. Abstract
Simultaneous
genotyping and species identification using hybridization pattern recognition
analysis of generic Mycobacterium DNA arrays.
Genome Res. 1998 May;8(5):435-48.
Yeh
RW, Ponce de Leon A, Agasino CB, Hahn JA, Daley CL, Hopewell PC, Small PM.
Stability of
Mycobacterium tuberculosis DNA genotypes.
J Infect Dis. 1998 Apr;177(4):1107-11.
Dissemination of
Mycobacterium tuberculosis across the San Francisco Bay Area.
J Infect Dis. 1998 Apr;177(4):1104-7.
The evolving
relation between humans and Mycobacterium tuberculosis.
N Engl J Med. 1998 Mar 5;338(10):677-8. No abstract available.
1997
Jasmer
RM, Ponce de Leon A, Hopewell PC, Alarcon RG, Moss AR, Paz EA, Schecter GF,
Small PM.
Tuberculosis in
Mexican-born persons in San Francisco: reactivation, acquired infection and
transmission.
Int J Tuberc Lung Dis. 1997 Dec;1(6):536-41.
Molecular
fingerprinting of Mycobacterium tuberculosis: how can it help the clinician?
Clin Infect Dis. 1997 Oct;25(4):806-10. Review.
PMID: 9356792 [PubMed - indexed for MEDLINE]
Has BCG
attenuated to impotence?
Nature. 1997 Sep 11;389(6647):133-4. No abstract available.
Ponce
de Leon A, Small PM, Sifuentes-Osornio J.
Highly
drug-resistant tuberculosis.
JAMA. 1997 Feb 26;277(8):628-9. No abstract available.
1996
Tuberculosis
research. Balancing the portfolio.
JAMA. 1996 Nov 13;276(18):1512-3. No abstract available.
Bradford
WZ, Martin JN, Reingold AL, Schecter GF, Hopewell PC, Small PM.
The changing
epidemiology of acquired drug-resistant tuberculosis in San Francisco, USA.
Lancet. 1996 Oct 5;348(9032):928-31.
Blower
SM, Small PM, Hopewell PC.
Control
strategies for tuberculosis epidemics: new models for old problems.
Science. 1996 Jul 26;273(5274):497-500.
Pulmonary
complications of HIV infection in Dar es Salaam, Tanzania. Role of bronchoscopy
and bronchoalveolar lavage.
Am J Respir Crit Care Med. 1996 Jul;154(1):105-10.
Casper
C, Singh SP, Rave S, Daley CL, Schecter GS, Riley LW, Kreiswirth BN, Small PM.
The
transcontinental transmission of tuberculosis: A molecular epidemiological
assessment.
Am J Public Health. 1996 Apr;86(4):551-3.
Woelffer
GB, Bradford WZ, Paz A, Small PM.
A
computer-assisted molecular epidemiologic approach to confronting the
reemergence of tuberculosis.
Am J Med Sci. 1996 Jan;311(1):17-22.
1995
Shafer
RW, Singh SP, Larkin C, Small PM.
Exogenous
reinfection with multidrug-resistant Mycobacterium tuberculosis in an
immunocompetent patient.
Tuber Lung Dis. 1995 Dec;76(6):575-7.
Blower
SM, McLean AR, Porco TC, Small PM, Hopewell PC, Sanchez MA, Moss AR.
The intrinsic
transmission dynamics of tuberculosis epidemics.
Nat Med. 1995 Aug;1(8):815-21.
Towards an
understanding of the global migration of Mycobacterium tuberculosis.
J Infect Dis. 1995 Jun;171(6):1593-4. No abstract available.
Shafer
RW, Small PM, Larkin C, Singh SP, Kelly P, Sierra MF, Schoolnik G, Chirgwin KD.
Temporal trends
and transmission patterns during the emergence of multidrug-resistant
tuberculosis in New York City: a molecular epidemiologic assessment.
J Infect Dis. 1995 Jan;171(1):170-6.
1994
Small
PM, Hopewell PC, Singh SP, Paz A, Parsonnet J, Ruston DC, Schecter GF, Daley
CL, Schoolnik GK.
The epidemiology
of tuberculosis in San Francisco. A population-based study using conventional
and molecular methods.
N Engl J Med. 1994 Jun 16;330(24):1703-9.
Small
PM, Hopewell PC, Schecter GF, Chaisson RE, Goodman PC.
Evolution of
chest radiographs in treated patients with pulmonary tuberculosis and HIV
infection.
J Thorac Imaging. 1994 Spring;9(2):74-7.
1993
Small
PM, McClenny NB, Singh SP, Schoolnik GK, Tompkins LS, Mickelsen PA.
Molecular strain
typing of Mycobacterium tuberculosis to confirm cross-contamination in the
mycobacteriology laboratory and modification of procedures to minimize
occurrence of false-positive cultures.
J Clin Microbiol. 1993 Jul;31(7):1677-82.
Molecular
epidemiology and the new tuberculosis.
Infect Agents Dis. 1993 Jun;2(3):132-8. Review.
Small
PM, Shafer RW, Hopewell PC, Singh SP, Murphy MJ, Desmond E, Sierra MF,
Schoolnik GK.
Exogenous
reinfection with multidrug-resistant Mycobacterium tuberculosis in patients
with advanced HIV infection.
N Engl J Med. 1993 Apr 22;328(16):1137-44.
1992
van
Embden JD, van Soolingen D, Small PM, Hermans PW.
Genetic markers
for the epidemiology of tuberculosis.
Res Microbiol. 1992 May;143(4):385-91. Review. No abstract available.
Daley
CL, Small PM, Schecter GF, Schoolnik GK, McAdam RA, Jacobs WR Jr, Hopewell PC.
An outbreak of
tuberculosis with accelerated progression among persons infected with the human
immunodeficiency virus. An analysis using restriction-fragment-length
polymorphisms.
N Engl J Med. 1992 Jan 23;326(4):231-5.
1991
Small
PM, Schecter GF, Goodman PC, Sande MA, Chaisson RE, Hopewell PC.
[HIV infection
and tuberculosis]
Dtsch Med Wochenschr. 1991 Jun 7;116(23):919. German. No abstract available.
Small
PM, Schecter GF, Goodman PC, Sande MA, Chaisson RE, Hopewell PC.
Treatment of
tuberculosis in patients with advanced human immunodeficiency virus infection.
N Engl J Med. 1991 Jan 31;324(5):289-94.
1990
Vancomycin for
Staphylococcus aureus endocarditis in intravenous drug users.
Antimicrob Agents Chemother. 1990 Jun;34(6):1227-31.
1989
Small
PM, McPhaul LW, Sooy CD, Wofsy CB, Jacobson MA.
Cytomegalovirus
infection of the laryngeal nerve presenting as hoarseness in patients with
acquired immunodeficiency syndrome.
Am J Med. 1989 Jan;86(1):108-10. No abstract available.
Small PM, Goodman PC, Montgomery BA.
Case 9-1989: AIDS
and a Cavitary Pulmonary Lesion.
N Engl J Med, 1989; 321: 395.
1987
Sande
MA, Sande ER, Woolwine JD, Hackbarth CJ, Small PM.
The influence of
fever on the development of experimental Streptococcus pneumoniae meningitis.
J Infect Dis. 1987 Nov;156(5):849-50. No abstract available.
1986
Small
PM, Tauber MG, Hackbarth CJ, Sande MA.
Influence of body
temperature on bacterial growth rates in experimental pneumococcal meningitis
in rabbits.
Infect Immun. 1986 May;52(2):484-7.
PMID: 3699893 [PubMed - indexed for MEDLINE]
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These pages were designed by
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Last updated June, 2002