Research Topics
Experimental Methods
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Chemical Exchange Dynamics – Solute Solvent Complexes and Other Systems
Organic solvents play a substantial role in practical chemistry by
influencing the reactivity of dissolved solutes. Specific intermolecular
interactions, such as hydrogen bonding, can lead to structurally
characterizable solute-solvent complexes that are constantly forming and
dissociating on very short time scales under thermal equilibrium conditions.
Dynamics of these transient species can play an important role in the
physical and chemical properties of a solute-solvent system by affecting
reaction rates, reaction mechanisms, and product ratios. For organic
solutions, we have shown that solute-solvent complexes form and dissociate
on picosecond timescales that cannot be measured by NMR and other methods.

Figure 1 shows a cartoon of an anisotropic solute molecule and a
solute-solvent complex. The anisotropic intermolecular interactions can lead
to the formation of a well defined complex. The interactions are weak,
comparable to the thermal energy in the system. Therefore, the complexes are
not long lived. There is equilibrium between the free solute, that is a
solute that is not complexed, and the solute-solvent complex. Under thermal
equilibrium conditions, complexes are continually dissociating to form free
solvent molecules, and free solvent molecular a constantly associating with
solvent molecules to form complexes. Because the system is in thermal
equilibrium, the numbers of complexes and free solvent molecules are time
independent.

The upper left portion of figure 2 shows the spectrum of the hydroxyl
stretch of phenol-OD (OH hydroxyl replaced with OD) in the mixed solvent of
benzene and CCl4 (29 mol % benzene, 71 mol % CCl4). Phenol forms a p
hydrogen bonding complex with benzene. Phenol-OD is used to shift the
hydroxyl stretch absorption below the C-H stretch frequencies. The mixed
solvent of benzene/CCl4 is used to shift the equilibrium so that the two
peaks are about the same amplitude. The structure of free phenol and the
phenol-benzene complex is shown in the figure to the upper right. The
spectrum shows that the two species coexist, but the spectrum cannot yield
information on the time dependence of the dissociation and formation of the
complexes.
The lower left portion of figure 2 shows a 2D IR vibrational echo chemical
exchange spectrum taken at a time short compared to the chemical exchange.
The 2D IR vibrational echo method is akin to 2D NMR but operates on times
scales 9 orders of magnitude faster and directly probes the structural
degrees of freedom of molecular systems. The method is discussed below in
the Experimental Methods section. The two bands on the diagonal (dashed
line) arise from the two peaks in the absorption spectrum. As discussed
below, the red bands are positive going and correspond to vibrational echo
emission at the 0-1 vibrational transition frequency. The two blue bands
(negative going) below the diagonal arise from vibrational echo emission at
the 1-2 transition frequency. These peaks are shifted along the wm axis by
the vibrational anharmonicity of the OD hydroxyl stretching potential. The
bottom right side of figure 2 shows the 2D IR spectrum at a time that is
sufficiently long for a substantial amount of chemical exchange to have
occurred, that is, phenol-benzene complexes have dissociated to form free
phenol and free phenol has formed complexes with benzene. Off-diagonal peaks
have grown in. The off-diagonal peaks arise from the chemical exchange. The
peaks on the diagonal correspond to species that have not changed their
character. The important point is that the time dependent growth of the
off-diagonal peaks yields direct information on the rate of chemical
exchange. The experiment effectively labels the molecules at zero time and
then watches them interconvert as time progresses. The experimental method
does not perturb the thermal equilibrium of the system.
By measuring the growth of the off-diagonal peaks and the decay of the
diagonal peaks and using the proper data analysis, the chemical exchange
rate can be readily determined. Because the rate of complex dissociation is
equal to the rate of complex formation, the dynamics can be characterized by
the single parameter, the dissociation rate td. All of the necessary
parameters to fit the data are know except for td. Figure 3 shows the data
and the fits for the phenol-benzene system. The single adjustable parameter,
td = 10 ps.

Using ultrafast 2D IR vibrational echo chemical exchange spectroscopy we
have measured a variety of solute-solvent complex dynamics for alcohols,
silanols, and C-H O complexes of, for example, chloroform with acetone and
DMSO. Using the same method have also made the first measurements of
rotational isomerization around a carbon-carbon single bond in a room
temperature liquid and the structural switch between well defined substates
of a protein. The following is a list of publications describing our work on
chemical exchange dynamics of molecular systems.
Ultrafast 2D IR Vibrational Echo Chemical Exchange Spectroscopy Publications
332. “Ultrafast Dynamics of Solute-Solvent Complexation Observed at Thermal
Equilibrium in Real Time,” Junrong Zheng, Kyungwon Kwak, John Asbury, Xin
Chen, I. Piletic, and M. D. Fayer, Science 309, 1338-1343 (2005).
336. “Formation and Dissociation of Intra-intermolecular Hydrogen Bonded
Solute-Solvent Complexes: Chemical Exchange 2D IR Vibrational Echo
Spectroscopy,” Junrong Zheng, Kyungwon Kwak, Xin Chen, and M. D. Fayer, J.
Am. Chem. Soc. 128, 2977-2987 (2006).
344. “Ultrafast 2D IR Vibrational Echo Chemical Exchange Experiments and
Theory,” Kyungwon Kwak, Junrong Zheng, Hu Cang, and M. D. Fayer, J. Phys.
Chem. B. 110, 19998-20013 (2006).
350. “Ultrafast Carbon-Carbon Single Bond Rotational Isomerization in Room
Temperature Solution,” Junrong Zheng, Kyungwon Kwak, Jia Xie and M. D. Fayer
Science 313, 1951-1955 (2006).
351. “Phenol-Benzene Complexation Dynamics: Quantum Chemistry Calculation,
MD Simulations, and 2D IR Spectroscopy,” Kijeong Kwac, Chewook Lee, Yousung
Jung, Jaebeom Han, Kyungwon Kwak, Junrong Zheng, M. D. Fayer, and Minhaeng
Cho J. Chem. Phys. 125, 244508 (2006).
352. “Hydrogen Bond Lifetimes and Energetics for Solute-Solvent Complexes
Studied with 2D-IR Vibrational Echo Spectroscopy,” Junrong Zheng and M. D.
Fayer J. Am. Chem. Soc. 129, 4328-4335 (2007).
372. “Direct Observation of Fast Protein Conformational Switching,” Haruto
Ishikawa, Kyungwon Kwak, Jean K. Chung, Seongheun Kim and M. D. Fayer Proc.
Nat. Acad. Sci. U.S.A. 105, 8619-8624 (2008).
376. “Solute-Solvent Complex Kinetics and Thermodynamics Probe by 2D-IR
Vibrational Echo Chemical Exchange Spectroscopy,” Junrong Zheng and M. D.
Fayer J. Phys. Chem. B ASAP (2008).
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