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Effects of linker sequences on vesicle fusion mediated by lipid-anchored DNA oligonucleotides.
Chan YH, van Lengerich B, Boxer SG
Proc Natl Acad Sci U S A 2009 Jan 27 106(4):979-84 [abstract on PubMed] [citations on Google Scholar] [related articles] [full text] [order article]
Selected by | Rino Rappuoli / Axel Brunger / Josep Rizo
First evaluation 16 Mar 2009 | Latest evaluation 29 Jun 2009
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Faculty Comments & Author Responses
Faculty Member Comments
Rino Rappuoli
Chiron Corporation, Italy
Microbiology

New Finding

This paper shows that, in a model system, the soluble N-ethylmaleimide-sensitive factor attachment protein receptor (SNARE) proteins can be replaced by a lipid-oligonucleotide complex and that complementary oligonucleotides are able to drive vesicle fusions. This simplified fusion model driven by oligonucleotides provides a powerful tool to ask many of the important questions about vesicle fusions. For instance, they show that the addition of non-complementary nucleotides up to 25bp long changes the efficiency of vesicle fusion so that the distance from the membrane affects the efficiency of the fusion process.

In the early 1990s working independently, Cesare Montecucco, James Rothman, and Randy Schekman generated complementary data that led to the discovery that transmembrane proteins located in vesicles (v-SNAREs) and in target cell membranes (t-SNARES) mediate the specific fusion between different biological membranes. The finding that tetanus toxin blocks exocytosis of neurotransmitter-containing synaptic vesicles by cleaving VAMP/synaptobrevin, one of the SNARE proteins, provided evidence that this was a key molecule of the machinery that mediates vesicle-target membrane recognition and fusion and allowed to assign a function to the proteins identified with biochemical and genetic techniques. Since the initial discovery, we have learned that the molecular basis of biological membrane fusion is of fundamental importance to any form of life and is also at the basis of any other membrane fusion event, including viral entry into host cells. In essence, the membrane fusion is essential to organelle formation, to uptake and secretion of hormones and neurotransmitters, and to viral infection. In 2002, Rothman and Schekman received the Lasker Award for this discovery. The oligonucleotide-mediated fusion of vesicles described in this paper provides additional support to the present knowledge of this fundamental process of life and an invaluable tool to study the molecular mechanisms that govern it.




Competing interests: None declared
Evaluated 16 Mar 2009
Axel Brunger
Stanford University School of Medicine, United States of America
Structural Biology

New Finding
Controversial

This is an important study on liposome fusion that utilizes variable length synthetic lipid-oligonucleotide conjugates to systematically alter the separation between interacting liposomes. Both content-mixing and lipid-mixing indicators are employed.

It is found that lipid mixing generally proceeds at a much greater extent than content mixing. Surprisingly, lipid mixing of both inner and outer leaflets can occur without content mixing. This is a landmark study that calls into question liposome "fusion" assays that rely on lipid-mixing indicators to assess fusion. This study strongly suggests that future liposome fusion experiments (of SNARE-induced fusion, for example) have to employ content-mixing indicators in addition to lipid-mixing indicators.




Competing interests: None declared
Evaluated 6 May 2009
Josep Rizo
University of Texas Southwestern Medical Center at Dallas, United States of America
Structural Biology

New Finding
Tech Advance
Controversial

This paper shows the usefulness of complementary DNA oligonucleotides as models to study membrane fusion, and demonstrates that a lipid-mixing assay widely used to study soluble N-ethylmaleimide-sensitive factor attachment protein receptor (SNARE) function is not a good reporter of membrane fusion.

Complementary oligonucleotides anchored on separate vesicle populations are shown to mediate lipid mixing between the vesicles with very high efficiency (up to 80%), and insertion of linker sequences of different lengths between the membrane and the complementary sequences leads to a graded decrease in lipid mixing. Importantly, the oligonucleotides yielding most efficient lipid mixing lead to only 1.5% content mixing. This result emphatically shows that assays reporting only lipid mixing cannot be used to demonstrate membrane fusion. Although this notion is not new, a vast amount of the SNARE literature still uses the term ‘membrane fusion’ when only ‘lipid mixing’ has been demonstrated. Hopefully, this beautiful work by Boxer and colleagues will help to eliminate this confusion in the field.




Competing interests: None declared
Evaluated 29 Jun 2009
Faculty Comments & Author Responses

How to cite the Faculty of 1000 Biology evaluation(s) for this paper

1) To cite all the evaluations for this article:

Faculty of 1000 Biology: evaluations for Chan YH et al Proc Natl Acad Sci U S A 2009 Jan 27 106 (4) :979-84 http://f1000biology.com/article/id/1157241/evaluation

2) To cite an evaluation by a specific Faculty member:

Rino Rappuoli: Faculty of 1000 Biology, 16 Mar 2009 http://f1000biology.com/article/id/1157241/evaluation

Axel Brunger: Faculty of 1000 Biology, 6 May 2009 http://f1000biology.com/article/id/1157241/evaluation

Josep Rizo: Faculty of 1000 Biology, 29 Jun 2009 http://f1000biology.com/article/id/1157241/evaluation


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