Stanford Department of Chemistry Banner Image
----------------
Search Department of Chemistry
--------------
--------------
--------------
--------------
--------------
--------------
--------------
--------------
--------------
--------------
--------------


|
Chemistry Faculty :
Faculty Research Interests
Chaitan Khosla
Chaitan Khosla

Title: Chair, Chemical Engineering; Wells H. Rauser and Harold M. Petiprin Professor in the School of Engineering; Professor of Chemical Engineering, Chemistry, and Biochemistry, by courtesy (b. 1964)

Education: B.Tech., 1985, Indian Institute of Technology; Ph.D.,1990, California Institute of Technology; Postdoctoral, John Innes Centre, U.K., 1990-91

Awards: Dreyfus New Investigator Award, 1991; NSF Young Investigator Award, 1994-99; Packard Fellowship for Science and Engineering, 1994-99; AIChE Allan P. Colburn Award, 1997; ACS Lilly Award in Biological Chemistry, 1999; NSF Alan T. Waterman Award, 1999; ACS Pure Chemistry Award, 2000; Caltech Distinguished Alumni Award, 2000; Member, American Academy of Arts and Sciences, 2007; Arthur C. Cope Scholar Award, 2009; Member, National Academy of Engineering, 2009

Research Area: Bioorganic and Biophysical Chemistry

Phone: 650-723-6538

E-mail: khosla@stanford.edu

Website: The Khosla Group

-------------
Principal Research Interests

Research interests in this laboratory lie at the interface of chemistry and medicine.

For the past several years, we have investigated the catalytic mechanisms of modular megasynthases such as polyketide synthases, with the concomitant goal of harnessing their programmable chemistry for preparing pharmaceutically relevant natural products. Recent accomplishments include methods for heterologous production of polyketides; genetically reprogrammed biosynthesis of anthraquinones and polypropionates; and chemo-biosynthesis of new polyketides not readily affordable by synthetic or biological methods alone. These methodologies are already finding practical use. At the same time, we have placed a major emphasis on the biochemistry and structural biology of these giant protein assemblies. Fundamental insights into assembly line biosynthetic mechanisms have emerged, including the finding that protein-protein interactions play a central role in intermodular communications. In turn, these insights are highlighting opportunities for enhancing the efficiency of biosynthetic engineering. Over the next decade we envision that the predictive power of polyketide biosynthetic engineering will mature analogous to current protein engineering capabilities.

More recently, we have investigated the pathogenesis of Celiac Sprue, an HLA-DQ2 associated autoimmune disease of the small intestine that is induced by exposure to gluten from foodgrains such as wheat, rye and barley. Within the past few years, we have explored three potential therapeutic strategies for this widespread but overlooked disease. By dissecting the unique chemical features of gluten, we discovered an intimate link between proteolytic stability and immunotoxicity of gluten, and translated this knowledge into the design of an oral enzyme therapy for the disease. At the same time, we have synthesized and evaluated mechanism-based inhibitors of human transglutaminase 2, the predominant disease associated auto-antigen. Finally, our structural and mechanistic dissection of HLA-DQ2 has been used to design, synthesize and evaluate gluten peptide analogues that selectively inhibit disease associated T cells. We remain committed to the vision that, within the next decade, safe and effective drugs will start having measurable impact on the health of Celiac Sprue patients.

-------------
Representative Publications

Polyketide biosynthesis:
1) "Engineered biosynthesis of regioselectively modified aromatic polyketides using bimodular polyketide synthases," Y. Tang, T.S. Lee, C. Khosla, PLoS Biology, 2, 227 (2004).

2) "The 2.7 Å crystal structure of a 194 kDa homodimeric fragment of the 6-deoxyerythronolide B synthase," Y. Tang, C.Y. Kim, I.I. Mathews, D.E. Cane, C. Khosla, Proc. Natl. Acad. Sci. USA, 103, 11124-11129 (2006).

3) "Structure-based dissociation of a type I polyketide synthase module," A.Y. Chen, D.E. Cane, C. Khosla, J. Am. Chem. Soc., 128, 3067-3074 (2006).


Celiac Sprue:
1) "Rational design of combination enzyme therapy for celiac sprue," M. Siegel, M.T. Bethune, J. Gass, J. Ehren, J. Xia, A. Johannsen, T.B. Stuge, G.M. Gray, P.P. Lee, C. Khosla, Chem. & Biol, 13, 649-658 (2006).

2) "Inhibition of HLA-DQ2 mediated antigen presentation by analogues of a high affinity 33-residue peptide from a 2-gliadin," Xia, J., Siegel, M., Bergseng, E., L.M. Sollid, L.M., and C. Khosla, J. Am. Chem. Soc. 128, 1859-1867 (2006).

3) "Human transglutaminase 2 undergoes a large conformational change upon activation," D.M. Pinkas, P. Strop, A.T. Brunger, C. Khosla, PLoS Biol. , 5, e327 (2007).

-------------
Collaborators

David E. Cane, Ph.D. - Department of Chemistry, Brown University
M. Bishr Omary, M.D. Ph.D. - Gastroenterology, Stanford Medical School
Gary M. Gray, M.D. - Celiac Sprue Research Foundation
Karol Sestak, Ph.D. - Tulane National Primate Research Center, Tulane University
Ludvig M. Sollid, M.D., Ph.D. - Immunology, University of Oslo
Keith M. Rich, M.D. - Neurosurgery, Washington University

-------------
Current Trainees

Current Predoctoral Students - Undergraduate Institution
Abhirup Das (Chemistry) - Indian Institute Of Technology
Tommy diRaimondo (Chemical Engineering) University of Michigan, Ann Arbor
Jay Fitzgerald (Chemistry) - Middlebury College
Colin Harvey (Chemistry) - McGill University
Tracy Holmes (Chemical Engineering) - Vanderbilt University
Xi Jin (Chemistry) Fudan University, Shanghai
Shiven Kapur (Chemistry) - Indian Institute of Technology
Cornelius Kloeck (Chemistry) Jacobs University Bremen, Germany
Fong Tian Wong (Chemical Engineering) Imperial College, London
Xingye Yu (Chemical Engineering) McGill University

Current Postdoctoral - Doctoral Institution
Michael Bethune (Ph.D. Biochemistry) - Stanford University
Louise Charkoudian (Ph.D. Chemistry) - Duke University
Laila Dafik (Ph.D. Chemistry) - Tufts University
Belen Moron Flores (Ph.D. Chemistry) - University of Sevilla
Younjoo Lee (Ph.D. Chemistry) - State University of New York Stony Brook
Tiangang Liu (Ph.D. Chemistry) - Shanghai Jiaotong University, China
Ping-Hui (Grace) Szu (Ph.D. Chemistry) - University of Texas, Austin
Satoshi Yuzawa (Ph.D. Chemistry) - University of Tokyo
Kathia Rivera Zaleta (Ph.D. Biotechnology and Bioengineering) - University of Nebraska, Lincoln

Home | Department Overview | Academic Programs | Events | Faculty | Facilities
Contact Us | Stanford Home | Chemistry Intra-Department | Webmaster | © 2005 Stanford University. All Rights Reserved.

This file last modified Friday, 17-Apr-2009 10:03:50 PDT

Website by Stanford Design Group