Faculty
- Surya Ganguli
- Bernardo A. Huberman
I’m interested in the dynamics of informatio ... more - Yoshihisa Yamamoto
- Daniel S. Fisher
- Sebastian Doniach
Courses
Publications
- Function Constrains Network Architecture and Dynamics: A Case Study on the Yeast Cell Cycle Network
- One Dimensional Dynamics of Attention and Decision Making in LIP
- Memory Traces in Dynamical Systems
- Feedforward to the past: the relation between neuronal connectivity, amplification, and short-term memory
- Statistical Mechanics of Compressed Sensing
- Short-term memory in neuronal networks through dynamical compressed sensing
- The effects of molecular noise and size control on variability in the budding yeast cell cycle
- How to detect fluctuating order in the high-temperature superconductors
- Direct observation of hierarchical folding in single riboswitch aptamers
- Suppressing Brownian Motion of Individual Biomolecules in Solution
- Inside the Chaperonin toolbox: Theoretical and computational models for chaperonin mechanism
- Bayesian comparison of Markov models of molecular dynamics with detailed balance constraint
- Progress and Challenges in the Automated Construction of Markov State Models for Full Protein Systems
- Charge, hydrophobicity, and confined water: Putting past simulations into a simple theoretical framework
- Molecular simulation of ab initio protein folding for a millisecond folder NTL9(1-39)
- Enhanced Modeling via Network Theory: Adaptive Sampling of Markov State Models
- Protein folded states are kinetic hubs
- Bayesian inference for Brownian dynamics
- A Simple Theory of Protein Folding
- Rate of Adaptation in Large Sexual Populations
- The Rate at Which Asexual Populations Cross Fitness Valleys
- Evolutionary Dynamics
- The Speed of Evolution and Maintenance of Variation in Asexual Populations
- Ordered Phosphorylation Governs Oscillation of a Three-Protein Circadian Clock
- Thermal rectification through vacuum
- Universal scaling in nonequilibrium transport through a single channel Kondo dot
- Disorder-induced gap behavior in graphene nanoribbons
- Evaluation Of Ion Binding To Dna Duplexes Using A Size-Modified Poisson-Boltzmann Theory
- Minactionpath: Maximum Likelihood Trajectory For Large-Scale Structural Transitions In A Coarse-Grained Locally Harmonic Energy Landscape
- Condensation of Semiconductor Microcavity Exciton Polaritons
- Coherent zero-state and π-state in an exciton-polariton condensate array
- Observation of Bogoliubov excitations in exciton-polariton condensates
- Exciton-polariton Bose-einstein condensation
- Magnetic field dependence of the density of states of YBa2Cu3O6.95 as determined from the specific heat
- Enhanced Thermodynamic Stability of Epitaxial Oxide Thin Films
- Nanomechanical measurements of the sequence-dependent folding landscapes of single nucleic acid hairpins
- Statistical kinetics of macromolecular dynamics
- Critical Assessment of Nucleic Acid Electrostatics via Experimental and Computational Investigation of an Unfolded State Ensemble
- Derivation of Maxwell-Bloch-type equations by projection of quantum models
- Quantum filter reduction for measurement-feedback control via unsupervised manifold learning
- Precise characterization of the conformation fluctuations of freely diffusing DNA: beyond Rouse and Zimm
More
- AP Faculty Search
The Department of Applied Physics has begun an ope ... more - New Faculty: Surya Ganguli
Surya Ganguli, who leverages a broad and deep back ... more - New Faculty: Yuri Suzuki and Benjamin Lev
Yuri Suzuki, whose research deals broadly in the s ... more - PULSE Institute for Ultrafast Energy Science
- LINAC Coherent Light Source (LCLS)
- Stanford Photonics Research Center